RNA–Protein interactions for RNA: ENST00000425441.5

CCDC12-202, Transcript of coiled-coil domain containing 12, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC12, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-202ENST00000425441 CEP170P1Q96L14 293 aa14.68□□□□□ -0.06
CCDC12-202ENST00000425441 FAM193BQ96PV7 902 aaPredicted RBP14.68□□□□□ -0.06
CCDC12-202ENST00000425441 TMEM175Q9BSA9 504 aa14.68□□□□□ -0.06
CCDC12-202ENST00000425441 EMILIN2Q9BXX0 1053 aa14.68□□□□□ -0.06
CCDC12-202ENST00000425441 GJB4Q9NTQ9 266 aa14.68□□□□□ -0.06
CCDC12-202ENST00000425441 DBR1Q9UK59 544 aaKnown RBP14.68□□□□□ -0.06
CCDC12-202ENST00000425441 KCNJ14Q9UNX9 436 aa14.68□□□□□ -0.06
CCDC12-202ENST00000425441 USTQ9Y2C2 406 aa14.68□□□□□ -0.06
CCDC12-202ENST00000425441 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.67□□□□□ -0.06
CCDC12-202ENST00000425441 TBX3O15119 743 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 ASAP2O43150 1006 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 ANP32AP39687 249 aaKnown RBP14.67□□□□□ -0.06
CCDC12-202ENST00000425441 VCPP55072 806 aaKnown RBP14.67□□□□□ -0.06
CCDC12-202ENST00000425441 NPY5RQ15761 445 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 PPP4R3AQ6IN85 833 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 OTUD6AQ7L8S5 288 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 CABP7Q86V35 215 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 KSR1Q8IVT5 923 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 GBP3Q9H0R5 595 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 SFXN1Q9H9B4 322 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 RSAD1Q9HA92 442 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 IFT122Q9HBG6 1241 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 KCNMB3Q9NPA1 279 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 PCDHB2Q9Y5E7 798 aa14.67□□□□□ -0.06
CCDC12-202ENST00000425441 EML1O00423 815 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 SLC37A4O43826 429 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 ALDH2P05091 517 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 EPCAMP16422 314 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 SLC11A1P49279 550 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 GUCY1B3Q02153 619 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 PCBP1Q15365 356 aaKnown RBP eCLIP14.66□□□□□ -0.06
CCDC12-202ENST00000425441 EPHA7Q15375 998 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 LONRF3Q496Y0 759 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 ELMSAN1Q6PJG2 1045 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 MRPL10Q7Z7H8 261 aaKnown RBP14.66□□□□□ -0.06
CCDC12-202ENST00000425441 TMEM173Q86WV6 379 aaPredicted RBP14.66□□□□□ -0.06
CCDC12-202ENST00000425441 C4orf19Q8IY42 314 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 SLC22A17Q8WUG5 538 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 AUTS2Q8WXX7 1259 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 ACSF2Q96CM8 615 aaPredicted RBP14.66□□□□□ -0.06
CCDC12-202ENST00000425441 DHX33Q9H6R0 707 aaKnown RBP14.66□□□□□ -0.06
CCDC12-202ENST00000425441 UBN1Q9NPG3 1134 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 CDH22Q9UJ99 828 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 VAV3Q9UKW4 847 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 SSX2IPQ9Y2D8 614 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 FAN1Q9Y2M0 1017 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 TCHHQ07283 1943 aa14.66□□□□□ -0.06
CCDC12-202ENST00000425441 MEIS3P2A8K0S8 358 aa14.65□□□□□ -0.06
CCDC12-202ENST00000425441 CCNT1O60563 726 aaKnown RBP14.65□□□□□ -0.06
CCDC12-202ENST00000425441 BAG4O95429 457 aaKnown RBP14.65□□□□□ -0.06
CCDC12-202ENST00000425441 KRT2P35908 639 aa14.65□□□□□ -0.06
CCDC12-202ENST00000425441 NPEPPSP55786 919 aa14.65□□□□□ -0.06
CCDC12-202ENST00000425441 NCBP1Q09161 790 aaKnown RBP14.65□□□□□ -0.06
CCDC12-202ENST00000425441 PTPN14Q15678 1187 aa14.65□□□□□ -0.06
CCDC12-202ENST00000425441 AGMOQ6ZNB7 445 aa14.65□□□□□ -0.06
CCDC12-202ENST00000425441 C12orf76Q8N812 135 aaPredicted RBP14.65□□□□□ -0.06
CCDC12-202ENST00000425441 ATOH1Q92858 354 aaPredicted RBP14.65□□□□□ -0.06
CCDC12-202ENST00000425441 PHOX2BQ99453 314 aa14.65□□□□□ -0.06
CCDC12-202ENST00000425441 BRMS1Q9HCU9 246 aa14.65□□□□□ -0.06
CCDC12-202ENST00000425441 DNAJB4Q9UDY4 337 aa14.65□□□□□ -0.06
CCDC12-202ENST00000425441 DPP7Q9UHL4 492 aa14.65□□□□□ -0.06
CCDC12-202ENST00000425441 DENND4AQ7Z401 1863 aa14.65□□□□□ -0.06
CCDC12-202ENST00000425441 ERLIN2O94905 339 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 BRD1O95696 1058 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 WEE2P0C1S8 567 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 SRGAP2CP0DJJ0 459 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 NCLP19338 710 aaKnown RBP14.64□□□□□ -0.07
CCDC12-202ENST00000425441 KLRC2P26717 231 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 AXLP30530 894 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 YWHABP31946 246 aaKnown RBP14.64□□□□□ -0.07
CCDC12-202ENST00000425441 CCDC149Q6ZUS6 474 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 OTOP3Q7RTS5 596 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 GPR149Q86SP6 731 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 SLFN12Q8IYM2 578 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 SPRYD3Q8NCJ5 442 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 FBXO18Q8NFZ0 1043 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 OXER1Q8TDS5 423 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 BCL7CQ8WUZ0 217 aaPredicted RBP14.64□□□□□ -0.07
CCDC12-202ENST00000425441 PRPF31Q8WWY3 499 aaKnown RBP14.64□□□□□ -0.07
CCDC12-202ENST00000425441 TMEM143Q96AN5 459 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 CCDC51Q96ER9 411 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 KLHL5Q96PQ7 755 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 MTRQ99707 1265 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 LXNQ9BS40 222 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 MFSD1Q9H3U5 465 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 ZSWIM4Q9H7M6 989 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 MRPL17Q9NRX2 175 aaKnown RBP14.64□□□□□ -0.07
CCDC12-202ENST00000425441 ARID2Q68CP9 1835 aa14.64□□□□□ -0.07
CCDC12-202ENST00000425441 NRP1O14786 923 aa14.63□□□□□ -0.07
CCDC12-202ENST00000425441 DDHD2O94830 711 aa14.63□□□□□ -0.07
CCDC12-202ENST00000425441 PDGFBP01127 241 aaPredicted RBP14.63□□□□□ -0.07
CCDC12-202ENST00000425441 URODP06132 367 aa14.63□□□□□ -0.07
CCDC12-202ENST00000425441 ITGA4P13612 1032 aa14.63□□□□□ -0.07
CCDC12-202ENST00000425441 LAMTOR4Q0VGL1 99 aa14.63□□□□□ -0.07
CCDC12-202ENST00000425441 TFDP1Q14186 410 aa14.63□□□□□ -0.07
CCDC12-202ENST00000425441 MXD4Q14582 209 aaPredicted RBP14.63□□□□□ -0.07
CCDC12-202ENST00000425441 EMC2Q15006 297 aa14.63□□□□□ -0.07
CCDC12-202ENST00000425441 XKR9Q5GH70 373 aa14.63□□□□□ -0.07
CCDC12-202ENST00000425441 NCAPH2Q6IBW4 605 aa14.63□□□□□ -0.07
CCDC12-202ENST00000425441 TMC5Q6UXY8 1006 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms