RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 POTEMA6NI47 508 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 GAS2O43903 313 aaKnown RBP18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 CYP3A7P24462 503 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 DSC1Q08554 894 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 LILRA6Q6PI73 481 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 SMG8Q8ND04 991 aaKnown RBP18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 CCDC148Q8NFR7 591 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 SHDQ96IW2 340 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 MINDY3Q9H8M7 445 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 PIDD1Q9HB75 910 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 PRG3Q9Y2Y8 225 aaPredicted RBP18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 COL4A3BPQ9Y5P4 624 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 CACNA1BQ00975 2339 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 TGM5O43548 720 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 KINO60870 393 aaKnown RBP18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 HMGB1P09429 215 aaKnown RBP18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 SPATA31D3P0C874 917 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 MYBP10242 640 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 OR1G1P47890 313 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 PSMC5P62195 406 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 KRT32Q14532 448 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 RSPO4Q2I0M5 234 aaPredicted RBP18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 SPATA31D4Q6ZUB0 917 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 FNIP2Q9P278 1114 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 NUMBLQ9Y6R0 609 aa18.74■□□□□ 0.59
CHCHD3-202ENST00000423635 MTCL1Q9Y4B5 1905 aaKnown RBP18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 NID2Q14112 1375 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 ITGA4P13612 1032 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 NTRK3Q16288 839 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 PALB2Q86YC2 1186 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 EXOC8Q8IYI6 725 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 TBCKQ8TEA7 893 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 PRPF31Q8WWY3 499 aaKnown RBP18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 PHKBQ93100 1093 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 MBOAT7Q96N66 472 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 CNTNAP3BQ96NU0 1288 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 DDX23Q9BUQ8 820 aaKnown RBP18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 RNF26Q9BY78 433 aaPredicted RBP18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 CNTNAP3Q9BZ76 1288 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 C22orf23Q9BZE7 217 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 FOXQ1Q9C009 403 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 MIOSQ9NXC5 875 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 FBXO4Q9UKT5 387 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 NAP1L2Q9ULW6 460 aaPredicted RBP18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 PPME1Q9Y570 386 aa18.73■□□□□ 0.59
CHCHD3-202ENST00000423635 GPR179Q6PRD1 2367 aa18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 ARL5CA6NH57 179 aa18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 SDHBP21912 280 aa18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 GPC5P78333 572 aa18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 AKAP17AQ02040 695 aaKnown RBP18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 VARS2Q5ST30 1063 aaKnown RBP18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 PLA2G4FQ68DD2 849 aa18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 GET4Q7L5D6 327 aaPredicted RBP18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 GPR161Q8N6U8 529 aaKnown RBP18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 ETNPPLQ8TBG4 499 aa18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 SLC7A3Q8WY07 619 aa18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 RPP25Q9BUL9 199 aaKnown RBP18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 COLEC11Q9BWP8 271 aa18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 DHX33Q9H6R0 707 aaKnown RBP18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 SH3GLB2Q9NR46 395 aa18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 IPPQ9Y573 584 aa18.72■□□□□ 0.59
CHCHD3-202ENST00000423635 EPG5Q9HCE0 2579 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 KANSL1LA0AUZ9 987 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 SPTLC1O15269 473 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 ASAP2O43150 1006 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 LRRN2O75325 713 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 NR1I2O75469 434 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 ZMYND10O75800 440 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 SRGAP2CP0DJJ0 459 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 NPEPPSP55786 919 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 LAMTOR4Q0VGL1 99 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 PCBP1Q15365 356 aaKnown RBP eCLIP18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 USP41Q3LFD5 358 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 MOXD1Q6UVY6 613 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 FBXL16Q8N461 479 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 PSPC1Q8WXF1 523 aaKnown RBP18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 FGF14Q92915 247 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 GAD1Q99259 594 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 OSBPL6Q9BZF3 934 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 RNF39Q9H2S5 420 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 VPS54Q9P1Q0 977 aa18.71■□□□□ 0.59
CHCHD3-202ENST00000423635 TPRP12270 2363 aaKnown RBP18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 F8W810 466 aa18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 KRT37O76014 449 aa18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 TDP2O95551 362 aa18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 AXLP30530 894 aa18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 QARSP47897 775 aaKnown RBP18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 FGD1P98174 961 aa18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 PRKCQQ04759 706 aa18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 PARM1Q6UWI2 310 aa18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 Q6ZUG5 572 aa18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 ZNF579Q8NAF0 562 aaKnown RBP18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 TMEM143Q96AN5 459 aa18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 BCO2Q9BYV7 579 aa18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 GPR62Q9BZJ7 368 aa18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 PCDHGA2Q9Y5H1 932 aa18.7■□□□□ 0.58
CHCHD3-202ENST00000423635 KMT2BQ9UMN6 2715 aaPredicted RBP18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 EML1O00423 815 aa18.69■□□□□ 0.58
CHCHD3-202ENST00000423635 LAMTOR5O43504 91 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms