RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 PTGDRQ13258 359 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 CUL4AQ13619 759 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 HAUS3Q68CZ6 603 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 CDCA2Q69YH5 1023 aaPredicted RBP16.83■□□□□ 0.28
USB1-202ENST00000423271 PADI6Q6TGC4 694 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 DDX53Q86TM3 631 aaKnown RBP16.83■□□□□ 0.28
USB1-202ENST00000423271 CNNM3Q8NE01 707 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 MCPH1Q8NEM0 835 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 SUSD6Q92537 303 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 ZFP42Q96MM3 310 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 GAD1Q99259 594 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 S1PR5Q9H228 398 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 LRWD1Q9UFC0 647 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 CDH22Q9UJ99 828 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 HCFC2Q9Y5Z7 792 aa16.83■□□□□ 0.28
USB1-202ENST00000423271 ARHGEF35A5YM69 484 aa16.82■□□□□ 0.28
USB1-202ENST00000423271 ARL5CA6NH57 179 aa16.82■□□□□ 0.28
USB1-202ENST00000423271 GPR37L1O60883 481 aa16.82■□□□□ 0.28
USB1-202ENST00000423271 NPTXRO95502 500 aa16.82■□□□□ 0.28
USB1-202ENST00000423271 SRGAP2BP0DMP2 458 aa16.82■□□□□ 0.28
USB1-202ENST00000423271 CTSAP10619 480 aa16.82■□□□□ 0.28
USB1-202ENST00000423271 ALADP13716 330 aa16.82■□□□□ 0.28
USB1-202ENST00000423271 NCBP1Q09161 790 aaKnown RBP16.82■□□□□ 0.28
USB1-202ENST00000423271 SNX21Q969T3 373 aa16.82■□□□□ 0.28
USB1-202ENST00000423271 FAM193BQ96PV7 902 aaPredicted RBP16.82■□□□□ 0.28
USB1-202ENST00000423271 POLD4Q9HCU8 107 aa16.82■□□□□ 0.28
USB1-202ENST00000423271 MIOSQ9NXC5 875 aa16.82■□□□□ 0.28
USB1-202ENST00000423271 MUTYHQ9UIF7 546 aa16.82■□□□□ 0.28
USB1-202ENST00000423271 TDRD15B5MCY1 1934 aaKnown RBP16.81■□□□□ 0.28
USB1-202ENST00000423271 TTLL13PA6NNM8 815 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 PP2D1A8MPX8 630 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 K7ELQ4 463 aaPredicted RBP16.81■□□□□ 0.28
USB1-202ENST00000423271 NRP1O14786 923 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 INPPL1O15357 1258 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 CYP11B2P19099 503 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 AKAP5P24588 427 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 GJB2P29033 226 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 SCNN1GP51170 649 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 IL17AQ16552 155 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 MCTP1Q6DN14 999 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 RNF135Q8IUD6 432 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 IGSF22Q8N9C0 903 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 SNX29Q8TEQ0 813 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 CASP10Q92851 521 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 TMEM175Q9BSA9 504 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 TRIM6Q9C030 488 aaPredicted RBP16.81■□□□□ 0.28
USB1-202ENST00000423271 BHMT2Q9H2M3 363 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 UBN1Q9NPG3 1134 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 MARCH5Q9NX47 278 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 KANSL3Q9P2N6 904 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 SMC3Q9UQE7 1217 aa16.81■□□□□ 0.28
USB1-202ENST00000423271 PRG3Q9Y2Y8 225 aaPredicted RBP16.81■□□□□ 0.28
USB1-202ENST00000423271 A0A1B0GUA9 196 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 CARNS1A5YM72 827 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 LOC730098B7Z3J9 87 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 EDN1P05305 212 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 SSBP05455 408 aaKnown RBP eCLIP16.8■□□□□ 0.28
USB1-202ENST00000423271 MUTP22033 750 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 PTPN14Q15678 1187 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 SLC27A1Q6PCB7 646 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 ZBTB8OSQ8IWT0 167 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 COLGALT2Q8IYK4 626 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 RPGRIP1Q96KN7 1286 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 KIFC3Q9BVG8 833 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 PHF7Q9BWX1 381 aaPredicted RBP16.8■□□□□ 0.28
USB1-202ENST00000423271 FZD8Q9H461 694 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.8■□□□□ 0.28
USB1-202ENST00000423271 DDX19AQ9NUU7 478 aaKnown RBP16.8■□□□□ 0.28
USB1-202ENST00000423271 PRMT7Q9NVM4 692 aaPredicted RBP16.8■□□□□ 0.28
USB1-202ENST00000423271 KIAA1024Q9UPX6 916 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 USP20Q9Y2K6 914 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 FAN1Q9Y2M0 1017 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 KIF3AQ9Y496 699 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.8■□□□□ 0.28
USB1-202ENST00000423271 IRAK3Q9Y616 596 aa16.8■□□□□ 0.28
USB1-202ENST00000423271 F8W810 466 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 ALDH2P05091 517 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 EPCAMP16422 314 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 CDC25AP30304 524 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 OR1G1P47890 313 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 DSC1Q08554 894 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 PDIA5Q14554 519 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 BMS1Q14692 1282 aaKnown RBP16.79■□□□□ 0.28
USB1-202ENST00000423271 CBX2Q14781 532 aaPredicted RBP16.79■□□□□ 0.28
USB1-202ENST00000423271 HSCBQ8IWL3 235 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 GSTCDQ8NEC7 633 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 PRIMPOLQ96LW4 560 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 CCDC113Q9H0I3 377 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 PDZD7Q9H5P4 517 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 KLK14Q9P0G3 267 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 GIT1Q9Y2X7 761 aa16.79■□□□□ 0.28
USB1-202ENST00000423271 TECTAO75443 2155 aa16.78■□□□□ 0.28
USB1-202ENST00000423271 E9PMD0 336 aa16.78■□□□□ 0.28
USB1-202ENST00000423271 PRKCBP05771 671 aa16.78■□□□□ 0.28
USB1-202ENST00000423271 HOXB8P17481 243 aaPredicted RBP16.78■□□□□ 0.28
USB1-202ENST00000423271 LIG1P18858 919 aa16.78■□□□□ 0.28
USB1-202ENST00000423271 NAMPTP43490 491 aa16.78■□□□□ 0.28
USB1-202ENST00000423271 FAM187BQ17R55 369 aa16.78■□□□□ 0.28
USB1-202ENST00000423271 HERC4Q5GLZ8 1057 aaPredicted RBP16.78■□□□□ 0.28
USB1-202ENST00000423271 KANK3Q6NY19 840 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms