RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 MLH1P40692 756 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 OR1G1P47890 313 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 FOSBP53539 338 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 KANK3Q6NY19 840 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 TMC5Q6UXY8 1006 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 CCDC149Q6ZUS6 474 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 HACE1Q8IYU2 909 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 PLCD3Q8N3E9 789 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 GTF3C6Q969F1 213 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 CPB2Q96IY4 423 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 PRG3Q9Y2Y8 225 aaPredicted RBP17.97■□□□□ 0.47
COL18A1-205ENST00000423214 IPPQ9Y573 584 aa17.97■□□□□ 0.47
COL18A1-205ENST00000423214 C2CD2LO14523 706 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 ZBTB39O15060 712 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 DGAT1O75907 488 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 BRD1O95696 1058 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 SOD2P04179 222 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 CLCN4P51793 760 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 AFF1P51825 1210 aaKnown RBP17.96■□□□□ 0.47
COL18A1-205ENST00000423214 PTENP60484 403 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 CAPSQ13938 189 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 ELMSAN1Q6PJG2 1045 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 ZDHHC14Q8IZN3 488 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 NECAB1Q8N987 351 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 SMG8Q8ND04 991 aaKnown RBP17.96■□□□□ 0.47
COL18A1-205ENST00000423214 ACSF2Q96CM8 615 aaPredicted RBP17.96■□□□□ 0.47
COL18A1-205ENST00000423214 KLHL5Q96PQ7 755 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 HERC2P3Q9BVR0 1158 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 APOL6Q9BWW8 343 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 EIF2AQ9BY44 585 aaKnown RBP17.96■□□□□ 0.47
COL18A1-205ENST00000423214 TTC12Q9H892 705 aaPredicted RBP17.96■□□□□ 0.47
COL18A1-205ENST00000423214 XPNPEP1Q9NQW7 623 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 USTQ9Y2C2 406 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 SSX2IPQ9Y2D8 614 aa17.96■□□□□ 0.47
COL18A1-205ENST00000423214 NR1I2O75469 434 aa17.95■□□□□ 0.46
COL18A1-205ENST00000423214 SLITRK3O94933 977 aa17.95■□□□□ 0.46
COL18A1-205ENST00000423214 LARGE1O95461 756 aa17.95■□□□□ 0.46
COL18A1-205ENST00000423214 PDGFBP01127 241 aaPredicted RBP17.95■□□□□ 0.46
COL18A1-205ENST00000423214 ASGR2P07307 311 aa17.95■□□□□ 0.46
COL18A1-205ENST00000423214 ADH1AP07327 375 aa17.95■□□□□ 0.46
COL18A1-205ENST00000423214 CNPP09543 421 aaKnown RBP17.95■□□□□ 0.46
COL18A1-205ENST00000423214 AVPR2P30518 371 aa17.95■□□□□ 0.46
COL18A1-205ENST00000423214 TCF15Q12870 199 aa17.95■□□□□ 0.46
COL18A1-205ENST00000423214 DIS3L2Q8IYB7 885 aaKnown RBP17.95■□□□□ 0.46
COL18A1-205ENST00000423214 TNFRSF25Q93038 417 aa17.95■□□□□ 0.46
COL18A1-205ENST00000423214 PHOX2BQ99453 314 aa17.95■□□□□ 0.46
COL18A1-205ENST00000423214 CSRNP2Q9H175 543 aa17.95■□□□□ 0.46
COL18A1-205ENST00000423214 IRF2BPLQ9H1B7 796 aa17.95■□□□□ 0.46
COL18A1-205ENST00000423214 ANKEF1Q9NU02 776 aa17.95■□□□□ 0.46
COL18A1-205ENST00000423214 MYH11P35749 1972 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 ARL5CA6NH57 179 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 USO1O60763 962 aaKnown RBP17.94■□□□□ 0.46
COL18A1-205ENST00000423214 LYPLA2O95372 231 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 FDPSP14324 419 aaKnown RBP17.94■□□□□ 0.46
COL18A1-205ENST00000423214 TXKP42681 527 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 GLUD2P49448 558 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 SCNN1GP51170 649 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 MBTD1Q05BQ5 628 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 ME3Q16798 604 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 GPR149Q86SP6 731 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 IFNLR1Q8IU57 520 aaPredicted RBP17.94■□□□□ 0.46
COL18A1-205ENST00000423214 NSUN7Q8NE18 718 aaKnown RBP17.94■□□□□ 0.46
COL18A1-205ENST00000423214 ASAP3Q8TDY4 903 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 GAD1Q99259 594 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 POLR3FQ9H1D9 316 aaPredicted RBP17.94■□□□□ 0.46
COL18A1-205ENST00000423214 MFSD1Q9H3U5 465 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 MAN1C1Q9NR34 630 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 MARCH5Q9NX47 278 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 LIMD1Q9UGP4 676 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 HES2Q9Y543 173 aa17.94■□□□□ 0.46
COL18A1-205ENST00000423214 BTBD18B2RXH4 712 aa17.93■□□□□ 0.46
COL18A1-205ENST00000423214 RARRES1P49788 294 aa17.93■□□□□ 0.46
COL18A1-205ENST00000423214 POU5F1BQ06416 359 aa17.93■□□□□ 0.46
COL18A1-205ENST00000423214 C15orf39Q6ZRI6 1047 aa17.93■□□□□ 0.46
COL18A1-205ENST00000423214 OTOP3Q7RTS5 596 aa17.93■□□□□ 0.46
COL18A1-205ENST00000423214 COLGALT2Q8IYK4 626 aa17.93■□□□□ 0.46
COL18A1-205ENST00000423214 ZFP42Q96MM3 310 aa17.93■□□□□ 0.46
COL18A1-205ENST00000423214 SMOC2Q9H3U7 446 aa17.93■□□□□ 0.46
COL18A1-205ENST00000423214 NXF3Q9H4D5 531 aaKnown RBP17.93■□□□□ 0.46
COL18A1-205ENST00000423214 FAM86C1Q9NVL1 165 aa17.93■□□□□ 0.46
COL18A1-205ENST00000423214 DPP7Q9UHL4 492 aa17.93■□□□□ 0.46
COL18A1-205ENST00000423214 VWA8A3KMH1 1905 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 POTEMA6NI47 508 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 LRRIQ4A6NIV6 560 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 INPPL1O15357 1258 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 GLUD1P00367 558 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 ARF4P18085 180 aaPredicted RBP17.92■□□□□ 0.46
COL18A1-205ENST00000423214 GLRA2P23416 452 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 NUBP1P53384 320 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 DSC1Q08554 894 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 SLC27A1Q6PCB7 646 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 PIGOQ8TEQ8 1089 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 ATOH1Q92858 354 aaPredicted RBP17.92■□□□□ 0.46
COL18A1-205ENST00000423214 RPS6KC1Q96S38 1066 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 HSD17B14Q9BPX1 270 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 NFKBIZQ9BYH8 718 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 GIT1Q9Y2X7 761 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 CITO14578 2027 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 MYH15Q9Y2K3 1946 aa17.92■□□□□ 0.46
COL18A1-205ENST00000423214 USP34Q70CQ2 3546 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms