RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 FUCA2Q9BTY2 467 aa17.22■□□□□ 0.35
DDX55-203ENST00000421670 GBP3Q9H0R5 595 aa17.22■□□□□ 0.35
DDX55-203ENST00000421670 PDZD7Q9H5P4 517 aa17.22■□□□□ 0.35
DDX55-203ENST00000421670 TMEM206Q9H813 350 aa17.22■□□□□ 0.35
DDX55-203ENST00000421670 EXOC7Q9UPT5 735 aa17.22■□□□□ 0.35
DDX55-203ENST00000421670 TRIM49BA6NDI0 452 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 TGFB1I1O43294 461 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 KIF20AO95235 890 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 PIGRP01833 764 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 EEF1DP3Q658K8 133 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 NOTUMQ6P988 496 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 ZPBP2Q6X784 338 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 MLKLQ8NB16 471 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 HAPLN2Q9GZV7 340 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 DNAJC25Q9H1X3 360 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 SEMA6BQ9H3T3 888 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 ANO10Q9NW15 660 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 RALGAPA2Q2PPJ7 1873 aa17.21■□□□□ 0.35
DDX55-203ENST00000421670 A0A1B0GUA9 196 aa17.2■□□□□ 0.34
DDX55-203ENST00000421670 PSMA7O14818 248 aa17.2■□□□□ 0.34
DDX55-203ENST00000421670 CCDC192P0DO97 292 aa17.2■□□□□ 0.34
DDX55-203ENST00000421670 ACRP10323 421 aa17.2■□□□□ 0.34
DDX55-203ENST00000421670 HARSP12081 509 aaKnown RBP17.2■□□□□ 0.34
DDX55-203ENST00000421670 MATR3P43243 847 aaKnown RBP eCLIP17.2■□□□□ 0.34
DDX55-203ENST00000421670 PMS1P54277 932 aaKnown RBP17.2■□□□□ 0.34
DDX55-203ENST00000421670 NCBP1Q09161 790 aaKnown RBP17.2■□□□□ 0.34
DDX55-203ENST00000421670 ZNF568Q3ZCX4 644 aa17.2■□□□□ 0.34
DDX55-203ENST00000421670 TWF2Q6IBS0 349 aaKnown RBP17.2■□□□□ 0.34
DDX55-203ENST00000421670 ZBTB33Q86T24 672 aa17.2■□□□□ 0.34
DDX55-203ENST00000421670 NELFBQ8WX92 580 aa17.2■□□□□ 0.34
DDX55-203ENST00000421670 LINC01599Q8WXQ3 324 aa17.2■□□□□ 0.34
DDX55-203ENST00000421670 SEPT8Q92599 483 aa17.2■□□□□ 0.34
DDX55-203ENST00000421670 TYW1Q9NV66 732 aaKnown RBP17.2■□□□□ 0.34
DDX55-203ENST00000421670 LAMA3Q16787 3333 aa17.2■□□□□ 0.34
DDX55-203ENST00000421670 ABLIM1O14639 778 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 CLIC2O15247 247 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 TOM1L1O75674 476 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 PROZP22891 400 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 ADSSP30520 456 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 AXLP30530 894 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 STX17P56962 302 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 FPGSQ05932 587 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 PAK1Q13153 545 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 ANO6Q4KMQ2 910 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 MPZL3Q6UWV2 235 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 P2RX5Q93086 422 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 DHTKD1Q96HY7 919 aaPredicted RBP17.19■□□□□ 0.34
DDX55-203ENST00000421670 CBWD1Q9BRT8 395 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 EIF2AQ9BY44 585 aaKnown RBP17.19■□□□□ 0.34
DDX55-203ENST00000421670 PTPRHQ9HD43 1115 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 AGPAT3Q9NRZ7 376 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 TNFSF13BQ9Y275 285 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 PDCD11Q14690 1871 aaKnown RBP17.19■□□□□ 0.34
DDX55-203ENST00000421670 N4BP3O15049 544 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 NPTXRO95502 500 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 IBSPP21815 317 aaPredicted RBP17.19■□□□□ 0.34
DDX55-203ENST00000421670 PPP1R2P41236 205 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 DSC3Q14574 896 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 NOLC1Q14978 699 aaKnown RBP eCLIP17.19■□□□□ 0.34
DDX55-203ENST00000421670 ZCWPW2Q504Y3 356 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 CENPPQ6IPU0 288 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 CNKSR3Q6P9H4 555 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 SLC27A1Q6PCB7 646 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 HS2ST1Q7LGA3 356 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 POMGNT1Q8WZA1 660 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 APBB2Q92870 758 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 ADAM2Q99965 735 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 TCHPQ9BT92 498 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 CDT1Q9H211 546 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 IL23AQ9NPF7 189 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 DACH1Q9UI36 760 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 NR2E3Q9Y5X4 410 aa17.19■□□□□ 0.34
DDX55-203ENST00000421670 PDXKO00764 312 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 CLDN3O15551 220 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 ZSCAN20P17040 1043 aaPredicted RBP17.18■□□□□ 0.34
DDX55-203ENST00000421670 CCNE1P24864 410 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 EPHB4P54760 987 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 PPIGQ13427 754 aaKnown RBP eCLIP17.18■□□□□ 0.34
DDX55-203ENST00000421670 UBXN11Q5T124 520 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 ANKRD40Q6AI12 368 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 ARMCX5Q6P1M9 558 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 CEP120Q8N960 986 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 ZSWIM2Q8NEG5 633 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 EEF2KMTQ96G04 330 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 MED15Q96RN5 788 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 LBHD1Q9BQE6 289 aaPredicted RBP17.18■□□□□ 0.34
DDX55-203ENST00000421670 ADPGKQ9BRR6 497 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 FTHL17Q9BXU8 183 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 PCIF1Q9H4Z3 704 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 CHST12Q9NRB3 414 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 TTC3P53804 2025 aa17.18■□□□□ 0.34
DDX55-203ENST00000421670 CYP2J2P51589 502 aa17.17■□□□□ 0.34
DDX55-203ENST00000421670 MCL1Q07820 350 aa17.17■□□□□ 0.34
DDX55-203ENST00000421670 SEZ6Q53EL9 994 aa17.17■□□□□ 0.34
DDX55-203ENST00000421670 C16orf59Q7L2K0 433 aa17.17■□□□□ 0.34
DDX55-203ENST00000421670 RTN4RL1Q86UN2 441 aaPredicted RBP17.17■□□□□ 0.34
DDX55-203ENST00000421670 RPUSD2Q8IZ73 545 aaKnown RBP17.17■□□□□ 0.34
DDX55-203ENST00000421670 NOC3LQ8WTT2 800 aaKnown RBP17.17■□□□□ 0.34
DDX55-203ENST00000421670 SAAL1Q96ER3 474 aa17.17■□□□□ 0.34
DDX55-203ENST00000421670 CCDC51Q96ER9 411 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms