RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 JAG1P78504 1218 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 SNX1Q13596 522 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 PPP2R5AQ15172 486 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 ELMO3Q96BJ8 720 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 POP1Q99575 1024 aaKnown RBP16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 FRMPD4Q14CM0 1322 aa16.33■□□□□ 0.2
SEMA3B-203ENST00000419007 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 C6orf118Q5T5N4 469 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 PGM2Q96G03 612 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 FIZ1Q96SL8 496 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 LXNQ9BS40 222 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 TAOK3Q9H2K8 898 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 TRPC6Q9Y210 931 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 MIF4GDA9UHW6 222 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 PSMD10O75832 226 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 SGPL1O95470 568 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 NF2P35240 595 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 PTGIRP43119 386 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 MMP13P45452 471 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 PPP3CAQ08209 521 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 KIF22Q14807 665 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 LONRF1Q17RB8 773 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 RBM26Q5T8P6 1007 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 ZNF317Q96PQ6 595 aaPredicted RBP16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 MTUS1Q9ULD2 1270 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 ATP8B3O60423 1300 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 A0A1W2PRG0 241 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 GOLGA8IPA6NC78 632 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 GOLGA8JA6NMD2 632 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 ARP10275 920 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 ECE1P42892 770 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 ADCY2Q08462 1091 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 TBC1D1Q86TI0 1168 aaPredicted RBP16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 FMNL3Q8IVF7 1028 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 ATXN2LQ8WWM7 1075 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 CBWD1Q9BRT8 395 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 ADAM7Q9H2U9 754 aa16.32■□□□□ 0.2
SEMA3B-203ENST00000419007 PODXLO00592 558 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 VAMP7P51809 220 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 GSCP56915 257 aaPredicted RBP16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 CALCOCO2Q13137 446 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 ZSWIM2Q8NEG5 633 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 KDM4CQ9H3R0 1056 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 UNC45AQ9H3U1 944 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 DMAC2Q9NW81 257 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 SEL1LQ9UBV2 794 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 ODF2LQ9ULJ1 636 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 ADAMTSL1Q8N6G6 1762 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 CYP26A1O43174 497 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 DLATP10515 647 aaKnown RBP16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 SLC15A2Q16348 729 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 ANKRD42Q8N9B4 389 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 C1orf54Q8WWF1 131 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 TDRD3Q9H7E2 651 aaKnown RBP16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 KCNK9Q9NPC2 374 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 ZNF831Q5JPB2 1677 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 MYH11P35749 1972 aa16.31■□□□□ 0.2
SEMA3B-203ENST00000419007 FOXO6A8MYZ6 492 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 POLR2MP0CAP2 368 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 ADRA2BP18089 450 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 VPS41P49754 854 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 STAT2P52630 851 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 ADCY1Q08828 1119 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 NEDD9Q14511 834 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 TRIP13Q15645 432 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 FAM228AQ86W67 206 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 CCDC127Q96BQ5 260 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 CENPTQ96BT3 561 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 GMCL1Q96IK5 515 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 PCDHB18PQ96TA0 734 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 DDX23Q9BUQ8 820 aaKnown RBP16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 NUP85Q9BW27 656 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 PARP2Q9UGN5 583 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 RIPK2O43353 540 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 AGTP01019 485 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 EZRP15311 586 aaKnown RBP16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 CLUL1Q15846 466 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 LACTB2Q53H82 288 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 PHLDB2Q86SQ0 1253 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 CCDC63Q8NA47 563 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 ZNF653Q96CK0 615 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 ZDHHC15Q96MV8 337 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 ASIC3Q9UHC3 531 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 KIF13BQ9NQT8 1826 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 FOCADQ5VW36 1801 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 POLRMTO00411 1230 aaKnown RBP16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 CYP3A4P08684 503 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 RARAP10276 462 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 HSPA6P17066 643 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 COILP38432 576 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 MAP2K1Q02750 393 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 CEP55Q53EZ4 464 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 PADI6Q6TGC4 694 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 SLC47A2Q86VL8 602 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 LMO3Q8TAP4 145 aa16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 ZNF564Q8TBZ8 553 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 N4BP2L2Q92802 583 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-203ENST00000419007 CLDN3O15551 220 aa16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 DRG2P55039 364 aaKnown RBP16.29■□□□□ 0.2
SEMA3B-203ENST00000419007 SPDYCQ5MJ68 293 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms