RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 TRIM6Q9C030 488 aaPredicted RBP20.29■□□□□ 0.84
SEMA3B-202ENST00000418576 UBE4BO95155 1302 aa20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 TOM1L1O75674 476 aa20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 PRPF6O94906 941 aaKnown RBP20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 RAB27AP51159 221 aa20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 SKOR2Q2VWA4 1001 aaPredicted RBP20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 ZNF658Q5TYW1 1059 aaPredicted RBP20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 EPM2AIP1Q7L775 607 aaPredicted RBP20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 RTN4RL1Q86UN2 441 aaPredicted RBP20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 KIAA0895Q8NCT3 520 aa20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 GLIS3Q8NEA6 775 aa20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 ZNF507Q8TCN5 953 aa20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 RNPC3Q96LT9 517 aaKnown RBP20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 USP20Q9Y2K6 914 aa20.28■□□□□ 0.84
SEMA3B-202ENST00000418576 A0A0U1RQF3 1178 aa20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 TTLL13PA6NNM8 815 aa20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 RBAK-RBAKDNI3L0D1 243 aa20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 PIGRP01833 764 aa20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 WDR5P61964 334 aaKnown RBP20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 SHHQ15465 462 aa20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 KLHL40Q2TBA0 621 aa20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 MYOCDQ8IZQ8 938 aa20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 SCFD1Q8WVM8 642 aa20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 PDZD7Q9H5P4 517 aa20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 FAM105AQ9NUU6 356 aa20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 SLC4A7Q9Y6M7 1214 aa20.27■□□□□ 0.84
SEMA3B-202ENST00000418576 EDN1P05305 212 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 KCNA1Q09470 495 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 C9orf50Q5SZB4 431 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 CCDC183Q5T5S1 534 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 CHRDL2Q6WN34 429 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 TRIML1Q8N9V2 468 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 LINC01599Q8WXQ3 324 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 MAN1B1Q9UKM7 699 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 C9IYK1 514 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 CLDN3O15551 220 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 STAG3L1P0CL83 205 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 MATR3P43243 847 aaKnown RBP eCLIP20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 BMT2Q1RMZ1 405 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 DCAF4L1Q3SXM0 396 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 ZNF568Q3ZCX4 644 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 SLFN12LQ6IEE8 588 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 MPZL3Q6UWV2 235 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 CDR2LQ86X02 465 aaPredicted RBP20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 HACE1Q8IYU2 909 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 PHOSPHO2Q8TCD6 241 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 CXXC1Q9P0U4 656 aaPredicted RBP20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 ANKFY1Q9P2R3 1169 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 LRFN2Q9ULH4 789 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 GDAQ9Y2T3 454 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 PCDHB7Q9Y5E2 793 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 PCDHB2Q9Y5E7 798 aa20.26■□□□□ 0.83
SEMA3B-202ENST00000418576 IBSPP21815 317 aaPredicted RBP20.25■□□□□ 0.83
SEMA3B-202ENST00000418576 FAM189BP81408 668 aa20.25■□□□□ 0.83
SEMA3B-202ENST00000418576 KNOP1Q1ED39 458 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-202ENST00000418576 UBXN11Q5T124 520 aa20.25■□□□□ 0.83
SEMA3B-202ENST00000418576 RASIP1Q5U651 963 aa20.25■□□□□ 0.83
SEMA3B-202ENST00000418576 PRPF38BQ5VTL8 546 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-202ENST00000418576 ISM2Q6H9L7 571 aa20.25■□□□□ 0.83
SEMA3B-202ENST00000418576 TDHQ8IZJ6 230 aa20.25■□□□□ 0.83
SEMA3B-202ENST00000418576 SLC9A7Q96T83 725 aa20.25■□□□□ 0.83
SEMA3B-202ENST00000418576 GBP3Q9H0R5 595 aa20.25■□□□□ 0.83
SEMA3B-202ENST00000418576 ELAC1Q9H777 363 aaKnown RBP20.25■□□□□ 0.83
SEMA3B-202ENST00000418576 PTPRHQ9HD43 1115 aa20.25■□□□□ 0.83
SEMA3B-202ENST00000418576 BIN1O00499 593 aa20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 ZNF623O75123 536 aa20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 NPTXRO95502 500 aa20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 EOMESO95936 686 aa20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 PROZP22891 400 aa20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 CAVIN1Q6NZI2 390 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 ECHDC2Q86YB7 292 aa20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 NELFCDQ8IXH7 590 aa20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 GUF1Q8N442 669 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 TOP1MTQ969P6 601 aa20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 PGBD4Q96DM1 585 aa20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 EIF2AQ9BY44 585 aaKnown RBP20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 TMEM161AQ9NX61 479 aa20.24■□□□□ 0.83
SEMA3B-202ENST00000418576 MCF2P10911 925 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 PPP1R2P41236 205 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 SNRPFP62306 86 aaKnown RBP20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 DEFB103AP81534 67 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 STIM1Q13586 685 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 MORC3Q14149 939 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 NOLC1Q14978 699 aaKnown RBP eCLIP20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 EEF1DP3Q658K8 133 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 HS2ST1Q7LGA3 356 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 ZBTB33Q86T24 672 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 NPAS4Q8IUM7 802 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 MAPK8IP1Q9UQF2 711 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 ATP2A2P16615 1042 aaKnown RBP20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 MCL1Q07820 350 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 COBLL1Q53SF7 1204 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 SMYD4Q8IYR2 804 aaPredicted RBP20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 RNF169Q8NCN4 708 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 GOLGA5Q8TBA6 731 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 POMGNT1Q8WZA1 660 aa20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 ZBTB45Q96K62 511 aaPredicted RBP20.23■□□□□ 0.83
SEMA3B-202ENST00000418576 CGNQ9P2M7 1197 aaKnown RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms