RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 NCBP1Q09161 790 aaKnown RBP13.73□□□□□ -0.21
SKA1-203ENST00000417656 BTG3Q14201 252 aaPredicted RBP13.73□□□□□ -0.21
SKA1-203ENST00000417656 CLLU1OSQ5K130 101 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 NT5DC1Q5TFE4 455 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 EEF1DP3Q658K8 133 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 SLC27A1Q6PCB7 646 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 FAM178BQ8IXR5 827 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 CMTR2Q8IYT2 770 aaKnown RBP13.73□□□□□ -0.21
SKA1-203ENST00000417656 CEP57L1Q8IYX8 460 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 DEFB123Q8N688 67 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 FIZ1Q96SL8 496 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 TRIM9Q9C026 710 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 NXF3Q9H4D5 531 aaKnown RBP13.73□□□□□ -0.21
SKA1-203ENST00000417656 TMEM134Q9H6X4 195 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 CERS4Q9HA82 394 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 HCSTQ9UBK5 93 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 MTUS1Q9ULD2 1270 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 IPPQ9Y573 584 aa13.73□□□□□ -0.21
SKA1-203ENST00000417656 A0A1B0GUA9 196 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 FRMD3A2A2Y4 597 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 HOXA2O43364 376 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 TRAK2O60296 914 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 SKIP12755 728 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 GAP43P17677 238 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 NMT1P30419 496 aaKnown RBP13.72□□□□□ -0.21
SKA1-203ENST00000417656 SYKP43405 635 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 AFMP43652 599 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 ASIC1P78348 528 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 STRN3Q13033 797 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 ATF7IP2Q5U623 682 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 HAUS6Q7Z4H7 955 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 SMG8Q8ND04 991 aaKnown RBP13.72□□□□□ -0.21
SKA1-203ENST00000417656 HELQQ8TDG4 1101 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 NTPCRQ9BSD7 190 aaKnown RBP13.72□□□□□ -0.21
SKA1-203ENST00000417656 TARS2Q9BW92 718 aaKnown RBP13.72□□□□□ -0.21
SKA1-203ENST00000417656 APOL6Q9BWW8 343 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 MRPL4Q9BYD3 311 aaKnown RBP13.72□□□□□ -0.21
SKA1-203ENST00000417656 TRIM6Q9C030 488 aaPredicted RBP13.72□□□□□ -0.21
SKA1-203ENST00000417656 LRRC27Q9C0I9 530 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 BLZF1Q9H2G9 400 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 SEMA6BQ9H3T3 888 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 TBC1D7Q9P0N9 293 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 HES2Q9Y543 173 aa13.72□□□□□ -0.21
SKA1-203ENST00000417656 MRPL42Q9Y6G3 142 aaKnown RBP13.72□□□□□ -0.21
SKA1-203ENST00000417656 GOLGA6L4A6NEF3 574 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 EPOPA6NHQ4 379 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 H0YCG3 227 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 ZNF623O75123 536 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 EOMESO95936 686 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 SLFN14P0C7P3 912 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 LINC00271P0C7V0 271 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 AMPD3Q01432 767 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 COASYQ13057 564 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 GRIN2CQ14957 1233 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 AGMOQ6ZNB7 445 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 ABI1Q8IZP0 508 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 FIBCD1Q8N539 461 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 ARNTL2Q8WYA1 636 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 CASD1Q96PB1 797 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 C17orf80Q9BSJ5 609 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 FGFBP2Q9BYJ0 223 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 TMEM117Q9H0C3 514 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 PANK4Q9NVE7 773 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 SEL1LQ9UBV2 794 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 KCNG1Q9UIX4 513 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 INPP5FQ9Y2H2 1132 aa13.71□□□□□ -0.21
SKA1-203ENST00000417656 CHD7Q9P2D1 2997 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 ITGA4P13612 1032 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 CASP5P51878 434 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 CUL4BQ13620 913 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 CSPP1Q1MSJ5 1256 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 DCAF4L1Q3SXM0 396 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 ZNF568Q3ZCX4 644 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 ZC2HC1CQ53FD0 456 aaPredicted RBP13.7□□□□□ -0.22
SKA1-203ENST00000417656 HERC4Q5GLZ8 1057 aaPredicted RBP13.7□□□□□ -0.22
SKA1-203ENST00000417656 CNNM4Q6P4Q7 775 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 GLB1LQ6UWU2 654 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 MRPL10Q7Z7H8 261 aaKnown RBP13.7□□□□□ -0.22
SKA1-203ENST00000417656 CCDC65Q8IXS2 484 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 LRRC43Q8N309 656 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 KCNN1Q92952 543 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 HPS3Q969F9 1004 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 PGBD4Q96DM1 585 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 BICD1Q96G01 975 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 PAGE5Q96GU1 130 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 GUCD1Q96NT3 240 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 TGS1Q96RS0 853 aaKnown RBP13.7□□□□□ -0.22
SKA1-203ENST00000417656 ACO2Q99798 780 aaKnown RBP13.7□□□□□ -0.22
SKA1-203ENST00000417656 C7orf25Q9BPX7 421 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 ADPGKQ9BRR6 497 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 CDT1Q9H211 546 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 PRDM12Q9H4Q4 367 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 MRPL44Q9H9J2 332 aaKnown RBP13.7□□□□□ -0.22
SKA1-203ENST00000417656 RSAD1Q9HA92 442 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 ANKFY1Q9P2R3 1169 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 USP25Q9UHP3 1055 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 TBX20Q9UMR3 447 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 TNFSF13BQ9Y275 285 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 SZT2Q5T011 3432 aa13.7□□□□□ -0.22
SKA1-203ENST00000417656 TDRD15B5MCY1 1934 aaKnown RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms