RNA–Protein interactions for RNA: ENST00000416159.5

PDLIM2-208, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-208ENST00000416159 AFF1P51825 1210 aaKnown RBP19.5■□□□□ 0.71
PDLIM2-208ENST00000416159 HAUS3Q68CZ6 603 aa19.5■□□□□ 0.71
PDLIM2-208ENST00000416159 MAEAQ7L5Y9 396 aa19.5■□□□□ 0.71
PDLIM2-208ENST00000416159 AUTS2Q8WXX7 1259 aa19.5■□□□□ 0.71
PDLIM2-208ENST00000416159 RPGRIP1Q96KN7 1286 aa19.5■□□□□ 0.71
PDLIM2-208ENST00000416159 APOL5Q9BWW9 433 aa19.5■□□□□ 0.71
PDLIM2-208ENST00000416159 TRIM6Q9C030 488 aaPredicted RBP19.5■□□□□ 0.71
PDLIM2-208ENST00000416159 ARHGEF35A5YM69 484 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 LRRIQ4A6NIV6 560 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 NRP1O14786 923 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 U2AF2P26368 475 aaKnown RBP eCLIP19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 ITIH3Q06033 890 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 RABEP1Q15276 862 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 CES5AQ6NT32 575 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 PPFIBP1Q86W92 1011 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 FAM122AQ96E09 287 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 PRIMPOLQ96LW4 560 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 GAD1Q99259 594 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 RNF39Q9H2S5 420 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 GPRC5CQ9NQ84 441 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 DZANK1Q9NVP4 752 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 GIT1Q9Y2X7 761 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 KIF3AQ9Y496 699 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 STK24Q9Y6E0 443 aa19.49■□□□□ 0.71
PDLIM2-208ENST00000416159 A0A1B0GUA9 196 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 ARL5CA6NH57 179 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 CYP11B2P19099 503 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 FXR2P51116 673 aaKnown RBP eCLIP19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 SLC27A1Q6PCB7 646 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 POTEGQ6S5H5 508 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 PADI6Q6TGC4 694 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 PPP4R3CPQ6ZMV5 832 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 ZBTB8OSQ8IWT0 167 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 COLGALT2Q8IYK4 626 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 C4orf32Q8N8J7 132 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 EDAQ92838 391 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 NECTIN4Q96NY8 510 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 VN1R3Q9BXE9 311 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 C2orf40Q9H1Z8 148 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 ADAM7Q9H2U9 754 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 PRMT7Q9NVM4 692 aaPredicted RBP19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 HES2Q9Y543 173 aa19.48■□□□□ 0.71
PDLIM2-208ENST00000416159 B4GALT5O43286 388 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 ST18O60284 1047 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 PLA2G5P39877 138 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 CCT6AP40227 531 aaKnown RBP19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 MLH1P40692 756 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 PDIA5Q14554 519 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 PTPN14Q15678 1187 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 FAM187BQ17R55 369 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 CDCA2Q69YH5 1023 aaPredicted RBP19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 SLC22A17Q8WUG5 538 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 APOL6Q9BWW8 343 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 EMILIN2Q9BXX0 1053 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 RAB34Q9BZG1 259 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 FZD8Q9H461 694 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 MIOSQ9NXC5 875 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 LRWD1Q9UFC0 647 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 SSX2IPQ9Y2D8 614 aa19.47■□□□□ 0.71
PDLIM2-208ENST00000416159 NR1I2O75469 434 aa19.46■□□□□ 0.71
PDLIM2-208ENST00000416159 NPTXRO95502 500 aa19.46■□□□□ 0.71
PDLIM2-208ENST00000416159 MTHFRP42898 656 aa19.46■□□□□ 0.71
PDLIM2-208ENST00000416159 OR1G1P47890 313 aa19.46■□□□□ 0.71
PDLIM2-208ENST00000416159 SCNN1GP51170 649 aa19.46■□□□□ 0.71
PDLIM2-208ENST00000416159 DSC1Q08554 894 aa19.46■□□□□ 0.71
PDLIM2-208ENST00000416159 KLHL5Q96PQ7 755 aa19.46■□□□□ 0.71
PDLIM2-208ENST00000416159 NXF3Q9H4D5 531 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-208ENST00000416159 MRPL17Q9NRX2 175 aaKnown RBP19.46■□□□□ 0.71
PDLIM2-208ENST00000416159 PRG3Q9Y2Y8 225 aaPredicted RBP19.46■□□□□ 0.71
PDLIM2-208ENST00000416159 NR2E1Q9Y466 385 aa19.46■□□□□ 0.71
PDLIM2-208ENST00000416159 ZMYM2Q9UBW7 1377 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 TDRD15B5MCY1 1934 aaKnown RBP19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 LILRB3O75022 631 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 SOD2P04179 222 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 EPCAMP16422 314 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 NAMPTP43490 491 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 TOB1P50616 345 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 ZXDAP98168 799 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 PTGDRQ13258 359 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 NBR1Q14596 966 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 PPP2R5AQ15172 486 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 CDR2LQ86X02 465 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 RIPOR3Q96MK2 946 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 ZFP42Q96MM3 310 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 HERC2P3Q9BVR0 1158 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 COLEC11Q9BWP8 271 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 MARCH5Q9NX47 278 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 DAXXQ9UER7 740 aaPredicted RBP19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 PARP2Q9UGN5 583 aa19.45■□□□□ 0.7
PDLIM2-208ENST00000416159 TECTAO75443 2155 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 LAD1O00515 517 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 N4BP3O15049 544 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 SSBP05455 408 aaKnown RBP eCLIP19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 URODP06132 367 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 AKAP5P24588 427 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 KLRC2P26717 231 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 ECM1Q16610 540 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 MAPK6Q16659 721 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 ATAT1Q5SQI0 421 aa19.44■□□□□ 0.7
PDLIM2-208ENST00000416159 RARS2Q5T160 578 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms