RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 SLC17A8Q8NDX2 589 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 EXT2Q93063 718 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 NAGPAQ9UK23 515 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 ALG6Q9Y672 507 aa13.74□□□□□ -0.21
SCN1B-202ENST00000415950 NEXMIFQ5QGS0 1516 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 RSPH10B2B2RC85 870 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 RSPH10BP0C881 870 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 KRT17Q04695 432 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 PLCB4Q15147 1175 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 SPATA21Q7Z572 469 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 ARMC2Q8NEN0 867 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 REEP2Q9BRK0 252 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 YY1AP1Q9H869 796 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 SLC38A10Q9HBR0 1119 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 ADAM22Q9P0K1 906 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 PCSK1NQ9UHG2 260 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 LEMD3Q9Y2U8 911 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 SYNGAP1Q96PV0 1343 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 H0YCG3 227 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 ZBED1O96006 694 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 ANKRD20A4Q4UJ75 823 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 ANKRD20A8PQ5CZ79 823 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 HABP4Q5JVS0 413 aaKnown RBP13.73□□□□□ -0.21
SCN1B-202ENST00000415950 ANKRD20A2Q5SQ80 823 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 ANKRD20A1Q5TYW2 823 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 ZBED8Q8IZ13 594 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 ATP6V0A1Q93050 837 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 CCDC17Q96LX7 622 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 CDCA7Q9BWT1 371 aaPredicted RBP13.73□□□□□ -0.21
SCN1B-202ENST00000415950 WDR11Q9BZH6 1224 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 MIS12Q9H081 205 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 INTS2Q9H0H0 1204 aaKnown RBP13.73□□□□□ -0.21
SCN1B-202ENST00000415950 CYP4F11Q9HBI6 524 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 CD209Q9NNX6 404 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 NRBP2Q9NSY0 501 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 ANGPTL2Q9UKU9 493 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 DNAJC3Q13217 504 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 NAALADL2Q58DX5 795 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 KLHDC7AQ5VTJ3 777 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 BARGINQ6ZT62 677 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 MCF2L2Q86YR7 1114 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 HSPH1Q92598 858 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 TRIM11Q96F44 468 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 MTA3Q9BTC8 594 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 EFHD1Q9BUP0 239 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 SLC13A1Q9BZW2 595 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 ISCUQ9H1K1 167 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
SCN1B-202ENST00000415950 M0QZ92 97 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 GPS1Q13098 491 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 DUSP9Q99956 384 aaKnown RBP13.72□□□□□ -0.21
SCN1B-202ENST00000415950 MARCOQ9UEW3 520 aaPredicted RBP13.72□□□□□ -0.21
SCN1B-202ENST00000415950 ZFP69BQ9UJL9 534 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 ADGRL3Q9HAR2 1447 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 COPEO14579 308 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 OATP04181 439 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 SOX5P35711 763 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 SCTRP47872 440 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 SEC23AQ15436 765 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 PPP4R3CPQ6ZMV5 832 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 ATG4AQ8WYN0 398 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 NUDT12Q9BQG2 462 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 TRIM56Q9BRZ2 755 aaKnown RBP13.72□□□□□ -0.21
SCN1B-202ENST00000415950 ALDH1B1P30837 517 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 CPA2P48052 419 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 USP11P51784 963 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 CASP7P55210 303 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 C1orf146Q5VVC0 180 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 WDR59Q6PJI9 974 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 ST13P4Q8IZP2 240 aaPredicted RBP13.72□□□□□ -0.21
SCN1B-202ENST00000415950 FAM161BQ96MY7 647 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 THEGQ9P2T0 379 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 HEY1Q9Y5J3 304 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 PXDNLA1KZ92 1463 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 PRPSAP2O60256 369 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 DNAJC6O75061 913 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 SRGAP2CP0DJJ0 459 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 CRLF3Q8IUI8 442 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 C18orf8Q96DM3 657 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 ERP44Q9BS26 406 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 ABCF3Q9NUQ8 709 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 KBTBD4Q9NVX7 518 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 USP15Q9Y4E8 981 aaPredicted RBP13.72□□□□□ -0.21
SCN1B-202ENST00000415950 SCINQ9Y6U3 715 aa13.72□□□□□ -0.21
SCN1B-202ENST00000415950 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.71□□□□□ -0.21
SCN1B-202ENST00000415950 MIF4GDA9UHW6 222 aaKnown RBP13.71□□□□□ -0.21
SCN1B-202ENST00000415950 KRT10P13645 584 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 CHRNA3P32297 505 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 ARL4AP40617 200 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 TTMPQ5BVD1 217 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 TMEM270Q6UE05 265 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 THNSL1Q8IYQ7 743 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 PPM1NQ8N819 430 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 NEDD1Q8NHV4 660 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 CDC26Q8NHZ8 85 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 SUDS3Q9H7L9 328 aaPredicted RBP13.71□□□□□ -0.21
SCN1B-202ENST00000415950 TMEM206Q9H813 350 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 STOML1Q9UBI4 398 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 COMTP21964 271 aa13.71□□□□□ -0.21
SCN1B-202ENST00000415950 ZBTB41Q5SVQ8 909 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms