RNA–Protein interactions for RNA: ENST00000415083.6

SS18-203, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SS18, Length 3,414 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-203ENST00000415083 COL2A1P02458 1487 aaPredicted RBP10.64□□□□□ -0.71
SS18-203ENST00000415083 TMEM110-MUSTN1A8MSY1 372 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 H0YHG0 523 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 GAS7O60861 476 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 MTA2O94776 668 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 TNFAIP3P21580 790 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 IVDP26440 423 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 STAT2P52630 851 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 SMTNP53814 917 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 GSCP56915 257 aaPredicted RBP10.64□□□□□ -0.71
SS18-203ENST00000415083 MRPS9P82933 396 aaKnown RBP10.64□□□□□ -0.71
SS18-203ENST00000415083 LACTB2Q53H82 288 aaPredicted RBP10.64□□□□□ -0.71
SS18-203ENST00000415083 SLC27A3Q5K4L6 730 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 SLC39A4Q6P5W5 647 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 PIGWQ7Z7B1 504 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 FAM71AQ8IYT1 594 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 AGBL1Q96MI9 1066 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 PWWP2AQ96N64 755 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 ZNF577Q9BSK1 485 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 TOPORSQ9NS56 1045 aaPredicted RBP10.64□□□□□ -0.71
SS18-203ENST00000415083 HAUS2Q9NVX0 235 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 ZNF219Q9P2Y4 722 aaPredicted RBP10.64□□□□□ -0.71
SS18-203ENST00000415083 PGAP2Q9UHJ9 254 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 ODF2LQ9ULJ1 636 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 USP20Q9Y2K6 914 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 PPIP5K2O43314 1243 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 CHKAP35790 457 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 SCTRP47872 440 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 WNT7BP56706 349 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 FKBP1AP62942 108 aaKnown RBP10.64□□□□□ -0.71
SS18-203ENST00000415083 MPP2Q14168 576 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 HELQQ8TDG4 1101 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 CLEC4DQ8WXI8 215 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 DHX38Q92620 1227 aaKnown RBP10.64□□□□□ -0.71
SS18-203ENST00000415083 ART4Q93070 314 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 CSRNP1Q96S65 589 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 TRPC6Q9Y210 931 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 ZHX2Q9Y6X8 837 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 AFF2P51816 1311 aa10.64□□□□□ -0.71
SS18-203ENST00000415083 GOLGA8IPA6NC78 632 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 GOLGA8JA6NMD2 632 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 CYP26A1O43174 497 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 EXOC3O60645 756 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 CETPP11597 493 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 MTMR3Q13615 1198 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 AUHQ13825 339 aaKnown RBP10.63□□□□□ -0.71
SS18-203ENST00000415083 SPDYCQ5MJ68 293 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 MSL1Q68DK7 614 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 RHBDF2Q6PJF5 856 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 PADI6Q6TGC4 694 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 SPATS2Q86XZ4 545 aaKnown RBP10.63□□□□□ -0.71
SS18-203ENST00000415083 FUKQ8N0W3 1084 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 CENPTQ96BT3 561 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 PGM2Q96G03 612 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 DBR1Q9UK59 544 aaKnown RBP10.63□□□□□ -0.71
SS18-203ENST00000415083 IPO5O00410 1097 aaKnown RBP10.63□□□□□ -0.71
SS18-203ENST00000415083 NFIBO00712 420 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 RIPK2O43353 540 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 VAMP7P51809 220 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 ZYXQ15942 572 aaKnown RBP10.63□□□□□ -0.71
SS18-203ENST00000415083 CCDC38Q502W7 563 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 RBM26Q5T8P6 1007 aaKnown RBP10.63□□□□□ -0.71
SS18-203ENST00000415083 RUFY4Q6ZNE9 571 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 VPS36Q86VN1 386 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 LRRC34Q8IZ02 419 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 NACC1Q96RE7 527 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 KIFC3Q9BVG8 833 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 SEPT11Q9NVA2 429 aaKnown RBP10.63□□□□□ -0.71
SS18-203ENST00000415083 SEL1LQ9UBV2 794 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 AGAP1Q9UPQ3 857 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 KIAA1217Q5T5P2 1943 aa10.63□□□□□ -0.71
SS18-203ENST00000415083 FAM187AA6NFU0 413 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 TOM1O60784 492 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 MMP10P09238 476 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 SLCO1A2P46721 670 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 RARRES1P49788 294 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 MESDQ14696 234 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 NSMFQ6X4W1 530 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 CBWD2Q8IUF1 395 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 ANKLE1Q8NAG6 615 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 C3orf20Q8ND61 904 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 MASTLQ96GX5 879 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 CABS1Q96KC9 395 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 KLC4Q9NSK0 619 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 HSPBP1Q9NZL4 362 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 CTNNAL1Q9UBT7 734 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 SCAF8Q9UPN6 1271 aaKnown RBP10.62□□□□□ -0.71
SS18-203ENST00000415083 FRMD4BQ9Y2L6 1034 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 PFASO15067 1338 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 SMIM23A6NLE4 172 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 TCP10L2B9ZVM9 353 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 K7ENM7 598 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 ATP9AO75110 1047 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 OAS1P00973 400 aaKnown RBP10.62□□□□□ -0.71
SS18-203ENST00000415083 CYP1A2P05177 515 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 CFHP08603 1231 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 POLR2MP0CAP2 368 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 CHRNA5P30532 468 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 HSD17B4P51659 736 aa10.62□□□□□ -0.71
SS18-203ENST00000415083 SOX10P56693 466 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms