RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 AMHR2Q16671 573 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 HFE2Q6ZVN8 426 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 IFNLR1Q8IU57 520 aaPredicted RBP17.25■□□□□ 0.35
ACTB-202ENST00000414620 CNNM3Q8NE01 707 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 ZSCAN31Q96LW9 406 aaPredicted RBP17.25■□□□□ 0.35
ACTB-202ENST00000414620 ZFP42Q96MM3 310 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 TMEM175Q9BSA9 504 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 TRIM6Q9C030 488 aaPredicted RBP17.25■□□□□ 0.35
ACTB-202ENST00000414620 CSRNP2Q9H175 543 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 FOXP1Q9H334 677 aaPredicted RBP17.25■□□□□ 0.35
ACTB-202ENST00000414620 NXF3Q9H4D5 531 aaKnown RBP17.25■□□□□ 0.35
ACTB-202ENST00000414620 TSHZ2Q9NRE2 1034 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 MARCH5Q9NX47 278 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 FAN1Q9Y2M0 1017 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 MYH11P35749 1972 aa17.25■□□□□ 0.35
ACTB-202ENST00000414620 MTCL1Q9Y4B5 1905 aaKnown RBP17.25■□□□□ 0.35
ACTB-202ENST00000414620 CARNS1A5YM72 827 aa17.24■□□□□ 0.35
ACTB-202ENST00000414620 NRP1O14786 923 aa17.24■□□□□ 0.35
ACTB-202ENST00000414620 HOXB8P17481 243 aaPredicted RBP17.24■□□□□ 0.35
ACTB-202ENST00000414620 OR1G1P47890 313 aa17.24■□□□□ 0.35
ACTB-202ENST00000414620 NCBP1Q09161 790 aaKnown RBP17.24■□□□□ 0.35
ACTB-202ENST00000414620 TPRNQ4KMQ1 711 aa17.24■□□□□ 0.35
ACTB-202ENST00000414620 CES5AQ6NT32 575 aa17.24■□□□□ 0.35
ACTB-202ENST00000414620 FBXO18Q8NFZ0 1043 aa17.24■□□□□ 0.35
ACTB-202ENST00000414620 FEZF2Q8TBJ5 459 aa17.24■□□□□ 0.35
ACTB-202ENST00000414620 EDAQ92838 391 aa17.24■□□□□ 0.35
ACTB-202ENST00000414620 CCDC51Q96ER9 411 aa17.24■□□□□ 0.35
ACTB-202ENST00000414620 POMKQ9H5K3 350 aa17.24■□□□□ 0.35
ACTB-202ENST00000414620 SH2B1Q9NRF2 756 aaPredicted RBP17.24■□□□□ 0.35
ACTB-202ENST00000414620 MIOSQ9NXC5 875 aa17.24■□□□□ 0.35
ACTB-202ENST00000414620 KANSL3Q9P2N6 904 aa17.24■□□□□ 0.35
ACTB-202ENST00000414620 ARL5CA6NH57 179 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 C2CD2LO14523 706 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 ALDH2P05091 517 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 LIG1P18858 919 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 AKAP5P24588 427 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 POU5F1BQ06416 359 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 GIT2Q14161 759 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 PCBP1Q15365 356 aaKnown RBP eCLIP17.23■□□□□ 0.353e-26■■■□□ 17.4
ACTB-202ENST00000414620 NOSTRINQ8IVI9 506 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 COLGALT2Q8IYK4 626 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 ERMNQ8TAM6 284 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 BSNDQ8WZ55 320 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 POLR3CQ9BUI4 534 aaPredicted RBP17.23■□□□□ 0.35
ACTB-202ENST00000414620 UBN1Q9NPG3 1134 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 KLK14Q9P0G3 267 aa17.23■□□□□ 0.35
ACTB-202ENST00000414620 DBR1Q9UK59 544 aaKnown RBP17.23■□□□□ 0.35
ACTB-202ENST00000414620 NOL7Q9UMY1 257 aaKnown RBP17.23■□□□□ 0.35
ACTB-202ENST00000414620 ARHGEF35A5YM69 484 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 SPDYE4A6NLX3 237 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 F8W810 466 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 XRCC6P12956 609 aaKnown RBP eCLIP17.22■□□□□ 0.354e-22■□□□□ 8.8
ACTB-202ENST00000414620 RBM25P49756 843 aaKnown RBP17.22■□□□□ 0.35
ACTB-202ENST00000414620 ZXDAP98168 799 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 PADI6Q6TGC4 694 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 ZBTB8OSQ8IWT0 167 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 MCPH1Q8NEM0 835 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 SLC22A17Q8WUG5 538 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 KLHL5Q96PQ7 755 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 NACC1Q96RE7 527 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 NFKBIZQ9BYH8 718 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 ADAM7Q9H2U9 754 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 POLD4Q9HCU8 107 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 PARP2Q9UGN5 583 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 IRAK3Q9Y616 596 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 ZNF318Q5VUA4 2279 aa17.22■□□□□ 0.35
ACTB-202ENST00000414620 TMEM221A6NGB7 291 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 M0R296 226 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 KLRC2P26717 231 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 RPA1P27694 616 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 CCT6AP40227 531 aaKnown RBP17.21■□□□□ 0.35
ACTB-202ENST00000414620 ITIH3Q06033 890 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 ORC2Q13416 577 aaPredicted RBP17.21■□□□□ 0.35
ACTB-202ENST00000414620 ECM1Q16610 540 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 TMEM132AQ24JP5 1023 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 SLC27A1Q6PCB7 646 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 TRIM67Q6ZTA4 783 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 TAS1R1Q7RTX1 841 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 ZBTB33Q86T24 672 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 HACE1Q8IYU2 909 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 RABGGTAQ92696 567 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 HERC2P3Q9BVR0 1158 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 EMILIN2Q9BXX0 1053 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 DZANK1Q9NVP4 752 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 CACNG4Q9UBN1 327 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 USP20Q9Y2K6 914 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 GIT1Q9Y2X7 761 aa17.21■□□□□ 0.35
ACTB-202ENST00000414620 VWA8A3KMH1 1905 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 TTLL13PA6NNM8 815 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 C2CD4DB7Z1M9 353 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 INPPL1O15357 1258 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 SOD2P04179 222 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 URODP06132 367 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 CNPP09543 421 aaKnown RBP17.2■□□□□ 0.34
ACTB-202ENST00000414620 MYBP10242 640 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 MTHFRP42898 656 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 DSC1Q08554 894 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 HAUS3Q68CZ6 603 aa17.2■□□□□ 0.34
ACTB-202ENST00000414620 CDCA2Q69YH5 1023 aaPredicted RBP17.2■□□□□ 0.34
ACTB-202ENST00000414620 TMC5Q6UXY8 1006 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms