RNA–Protein interactions for RNA: ENST00000413731.1

UPF3AP1-201, Transcript of UPF3A pseudogene 1, humanhuman

BASIC

Gene UPF3AP1, Length 1,126 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP1-201ENST00000413731 SWSAP1Q6NVH7 229 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 KANK3Q6NY19 840 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 MIS18BP1Q6P0N0 1132 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 NIPA1Q7RTP0 329 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 FRMD5Q7Z6J6 570 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 TMEM173Q86WV6 379 aaPredicted RBP9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 ECHDC2Q86YB7 292 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 TEX2Q8IWB9 1127 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 CKAP2LQ8IYA6 745 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 ABI1Q8IZP0 508 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 LRRC71Q8N4P6 559 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 LINC01465Q8N7H1 131 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 C12orf76Q8N812 135 aaPredicted RBP9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 TDRD5Q8NAT2 981 aaKnown RBP9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 ADAM32Q8TC27 787 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 BICD2Q8TD16 824 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 HELQQ8TDG4 1101 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 GIPC2Q8TF65 315 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 AUTS2Q8WXX7 1259 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 NECTIN4Q96NY8 510 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 ADAMTS10Q9H324 1103 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 EVA1BQ9NVM1 165 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 SPG21Q9NZD8 308 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 DOLKQ9UPQ8 538 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 AKT3Q9Y243 479 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 DOCK6Q96HP0 2047 aa9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 TDRD15B5MCY1 1934 aaKnown RBP9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 EP300Q09472 2414 aaPredicted RBP9.29□□□□□ -0.92
UPF3AP1-201ENST00000413731 ARID2Q68CP9 1835 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 NT5C1B-RDH14C9J2C7 533 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 IPO5O00410 1097 aaKnown RBP9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 ADAMTS3O15072 1205 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 FOSP01100 380 aaPredicted RBP9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 EPCAMP16422 314 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 XBP1P17861 261 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 FGFR4P22455 802 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 ZNF76P36508 570 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 NLRP11P59045 1033 aaKnown RBP9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 CLDN10P78369 228 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 KRT17Q04695 432 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 ITIH3Q06033 890 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 OXLD1Q5BKU9 147 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 KIAA1841Q6NSI8 718 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 CES5AQ6NT32 575 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 FAM43BQ6ZT52 329 aaPredicted RBP9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 ZNF598Q86UK7 904 aaKnown RBP9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 MRPL43Q8N983 215 aaKnown RBP9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 ANKK1Q8NFD2 765 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 WASF1Q92558 559 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 THAP11Q96EK4 314 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 TBC1D32Q96NH3 1257 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 MAP7D2Q96T17 732 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 KIF2CQ99661 725 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 ZMYND12Q9H0C1 365 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 ZBP1Q9H171 429 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 ORC3Q9UBD5 711 aaPredicted RBP9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 LIMCH1Q9UPQ0 1083 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 MIA3Q5JRA6 1907 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 MTCL1Q9Y4B5 1905 aaKnown RBP9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 CACNA1AO00555 2505 aa9.28□□□□□ -0.92
UPF3AP1-201ENST00000413731 MYH15Q9Y2K3 1946 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 DTNBO60941 627 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 ZNF16P17020 682 aaPredicted RBP9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 MTHFRP42898 656 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 BCAR1P56945 870 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 UGCGQ16739 394 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 ZNF746Q6NUN9 644 aaPredicted RBP9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 CCDC83Q8IWF9 413 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 ZDHHC14Q8IZN3 488 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 NSUN7Q8NE18 718 aaKnown RBP9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 BCL7CQ8WUZ0 217 aaPredicted RBP9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 CRYGNQ8WXF5 182 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 SCLT1Q96NL6 688 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 AIFM3Q96NN9 605 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 OCSTAMPQ9BR26 566 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 ZNF577Q9BSK1 485 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 MFSD1Q9H3U5 465 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 SH3GLB2Q9NR46 395 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 SH2B1Q9NRF2 756 aaPredicted RBP9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 DZANK1Q9NVP4 752 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 GABBR1Q9UBS5 961 aa9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 DBR1Q9UK59 544 aaKnown RBP9.27□□□□□ -0.93
UPF3AP1-201ENST00000413731 ANKRD33BA6NCL7 494 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 ZNF862O60290 1169 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 JAK2O60674 1132 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 ZC3H11AO75152 810 aaKnown RBP eCLIP9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 CSDE1O75534 798 aaKnown RBP9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 EOMESO95936 686 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 PSAPP07602 524 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 DARSP14868 501 aaKnown RBP9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 ZSCAN20P17040 1043 aaPredicted RBP9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 EIF4BP23588 611 aaKnown RBP9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 GPC3P51654 580 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 SETQ01105 290 aaPredicted RBP9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 FOXK2Q01167 660 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 PRKCEQ02156 737 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 MCTP2Q6DN12 878 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 EFCAB12Q6NXP0 572 aa9.26□□□□□ -0.93
UPF3AP1-201ENST00000413731 SMAP1Q8IYB5 467 aaPredicted RBP9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms