RNA–Protein interactions for RNA: ENST00000413137.6

RHBDD3-203, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-203ENST00000413137 TSHZ1Q6ZSZ6 1077 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 HS2ST1Q7LGA3 356 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 WNT8AQ9H1J5 351 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 ST3GAL5Q9UNP4 418 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 NFE2L3Q9Y4A8 694 aa28.41■■■□□ 2.14
RHBDD3-203ENST00000413137 PITPNM1O00562 1244 aa28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 CALUO43852 315 aaPredicted RBP28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 RPS6KA5O75582 802 aa28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 NR3C1P04150 777 aa28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 SFPQP23246 707 aaKnown RBP eCLIP28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 CD52P31358 61 aa28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 ZPBP2Q6X784 338 aa28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 LRRC55Q6ZSA7 311 aa28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 CCDC155Q8N6L0 562 aa28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 PRIMPOLQ96LW4 560 aa28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 TSG101Q99816 390 aa28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 PTPRHQ9HD43 1115 aa28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 SAMSN1Q9NSI8 373 aaKnown RBP28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 FANCLQ9NW38 375 aa28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 ANKFY1Q9P2R3 1169 aa28.4■■■□□ 2.14
RHBDD3-203ENST00000413137 TRIM43BA6NCK2 446 aa28.39■■■□□ 2.14
RHBDD3-203ENST00000413137 ITGB8P26012 769 aa28.39■■■□□ 2.14
RHBDD3-203ENST00000413137 CCL23P55773 120 aa28.39■■■□□ 2.14
RHBDD3-203ENST00000413137 EDRF1Q3B7T1 1238 aa28.39■■■□□ 2.14
RHBDD3-203ENST00000413137 CSGALNACT2Q8N6G5 542 aa28.39■■■□□ 2.14
RHBDD3-203ENST00000413137 TRIM43Q96BQ3 446 aaPredicted RBP28.39■■■□□ 2.14
RHBDD3-203ENST00000413137 SCLYQ96I15 445 aa28.39■■■□□ 2.14
RHBDD3-203ENST00000413137 SRRTQ9BXP5 876 aaKnown RBP28.39■■■□□ 2.14
RHBDD3-203ENST00000413137 PDZD7Q9H5P4 517 aa28.39■■■□□ 2.14
RHBDD3-203ENST00000413137 STYXL1Q9Y6J8 313 aa28.39■■■□□ 2.14
RHBDD3-203ENST00000413137 IKBKBO14920 756 aa28.38■■■□□ 2.13
RHBDD3-203ENST00000413137 NBNO60934 754 aa28.38■■■□□ 2.13
RHBDD3-203ENST00000413137 PROZP22891 400 aa28.38■■■□□ 2.13
RHBDD3-203ENST00000413137 CYP2J2P51589 502 aa28.38■■■□□ 2.13
RHBDD3-203ENST00000413137 TMEM132AQ24JP5 1023 aa28.38■■■□□ 2.13
RHBDD3-203ENST00000413137 ZBTB33Q86T24 672 aa28.38■■■□□ 2.13
RHBDD3-203ENST00000413137 ZC3H3Q8IXZ2 948 aaKnown RBP28.38■■■□□ 2.13
RHBDD3-203ENST00000413137 TNS4Q8IZW8 715 aa28.38■■■□□ 2.13
RHBDD3-203ENST00000413137 AGPAT5Q9NUQ2 364 aa28.38■■■□□ 2.13
RHBDD3-203ENST00000413137 DMAC2Q9NW81 257 aa28.38■■■□□ 2.13
RHBDD3-203ENST00000413137 TNFSF13BQ9Y275 285 aa28.38■■■□□ 2.13
RHBDD3-203ENST00000413137 A0A1B0GUA9 196 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 TOM1L1O75674 476 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 NR2F2P24468 414 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 NFX1Q12986 1120 aaKnown RBP28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 ADAM9Q13443 819 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 ARMCX5Q6P1M9 558 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 FOXR2Q6PJQ5 311 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 IRF2BP1Q8IU81 584 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 POMGNT1Q8WZA1 660 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 ERVK-5Q9HDB9 667 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 PRDM5Q9NQX1 630 aaPredicted RBP28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 PADI3Q9ULW8 664 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 BECN2A8MW95 431 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 CASP4P49662 377 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 FKBP3Q00688 224 aaKnown RBP28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 C12orf56Q8IXR9 622 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 GOLGA5Q8TBA6 731 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 SAAL1Q96ER3 474 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 HSPBP1Q9NZL4 362 aa28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 PIN4Q9Y237 131 aaKnown RBP28.37■■■□□ 2.13
RHBDD3-203ENST00000413137 A0A0B4J269 797 aa28.36■■■□□ 2.13
RHBDD3-203ENST00000413137 GOLGA8IPA6NC78 632 aa28.36■■■□□ 2.13
RHBDD3-203ENST00000413137 GOLGA8JA6NMD2 632 aa28.36■■■□□ 2.13
RHBDD3-203ENST00000413137 HARSP12081 509 aaKnown RBP28.36■■■□□ 2.13
RHBDD3-203ENST00000413137 PCBP1Q15365 356 aaKnown RBP eCLIP28.36■■■□□ 2.13
RHBDD3-203ENST00000413137 NFIL3Q16649 462 aa28.36■■■□□ 2.13
RHBDD3-203ENST00000413137 TPD52L1Q16890 204 aaPredicted RBP28.36■■■□□ 2.13
RHBDD3-203ENST00000413137 TMX1Q9H3N1 280 aa28.36■■■□□ 2.13
RHBDD3-203ENST00000413137 CGNQ9P2M7 1197 aaKnown RBP28.36■■■□□ 2.13
RHBDD3-203ENST00000413137 SMTNL1A8MU46 457 aa28.35■■■□□ 2.13
RHBDD3-203ENST00000413137 SNRPFP62306 86 aaKnown RBP28.35■■■□□ 2.13
RHBDD3-203ENST00000413137 PAK2Q13177 524 aa28.35■■■□□ 2.13
RHBDD3-203ENST00000413137 SEZ6Q53EL9 994 aa28.35■■■□□ 2.13
RHBDD3-203ENST00000413137 ZBTB41Q5SVQ8 909 aa28.35■■■□□ 2.13
RHBDD3-203ENST00000413137 MPZL3Q6UWV2 235 aa28.35■■■□□ 2.13
RHBDD3-203ENST00000413137 TCHPQ9BT92 498 aa28.35■■■□□ 2.13
RHBDD3-203ENST00000413137 ALPK3Q96L96 1907 aa28.34■■■□□ 2.13
RHBDD3-203ENST00000413137 GPR182O15218 404 aa28.34■■■□□ 2.13
RHBDD3-203ENST00000413137 CLDN3O15551 220 aa28.34■■■□□ 2.13
RHBDD3-203ENST00000413137 AKAP3O75969 853 aa28.34■■■□□ 2.13
RHBDD3-203ENST00000413137 GARTP22102 1010 aa28.34■■■□□ 2.13
RHBDD3-203ENST00000413137 MATR3P43243 847 aaKnown RBP eCLIP28.34■■■□□ 2.13
RHBDD3-203ENST00000413137 MCL1Q07820 350 aa28.34■■■□□ 2.13
RHBDD3-203ENST00000413137 ZNF568Q3ZCX4 644 aa28.34■■■□□ 2.13
RHBDD3-203ENST00000413137 SLC9A9Q8IVB4 645 aa28.34■■■□□ 2.13
RHBDD3-203ENST00000413137 EIF2AQ9BY44 585 aaKnown RBP28.34■■■□□ 2.13
RHBDD3-203ENST00000413137 CDT1Q9H211 546 aa28.34■■■□□ 2.13
RHBDD3-203ENST00000413137 SQORQ9Y6N5 450 aa28.34■■■□□ 2.13
RHBDD3-203ENST00000413137 KIAA0355O15063 1070 aa28.33■■■□□ 2.13
RHBDD3-203ENST00000413137 FAM189A1O60320 539 aa28.33■■■□□ 2.13
RHBDD3-203ENST00000413137 MGEA5O60502 916 aa28.33■■■□□ 2.13
RHBDD3-203ENST00000413137 CEP135Q66GS9 1140 aa28.33■■■□□ 2.13
RHBDD3-203ENST00000413137 SLFN12LQ6IEE8 588 aa28.33■■■□□ 2.13
RHBDD3-203ENST00000413137 TMEM174Q8WUU8 243 aa28.33■■■□□ 2.13
RHBDD3-203ENST00000413137 MSTO1Q9BUK6 570 aa28.33■■■□□ 2.13
RHBDD3-203ENST00000413137 AGO2Q9UKV8 859 aaKnown RBP28.33■■■□□ 2.13
RHBDD3-203ENST00000413137 CETN3O15182 167 aa28.33■■■□□ 2.12
RHBDD3-203ENST00000413137 ATP1A3P13637 1013 aa28.33■■■□□ 2.12
RHBDD3-203ENST00000413137 TCTN1Q2MV58 587 aa28.33■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms