RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 GRID2IPA4D2P6 1211 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 POTEFA5A3E0 1075 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 HNRNPRO43390 633 aaKnown RBP9.06□□□□□ -0.96
PBRM1-209ENST00000412587 PSAPP07602 524 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 KCNA2P16389 499 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 EEF1GP26641 437 aaKnown RBP9.06□□□□□ -0.96
PBRM1-209ENST00000412587 ATICP31939 592 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 SLCO1A2P46721 670 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 MMEL1Q495T6 779 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 EXOC8Q8IYI6 725 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 GGT7Q9UJ14 662 aa9.06□□□□□ -0.96
PBRM1-209ENST00000412587 ADGRB1O14514 1584 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 DCCP43146 1447 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 SMAPO00193 183 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 THAP12O43422 761 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 LPXNO60711 386 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 COBLO75128 1261 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 RASSF9O75901 435 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 POTEIP0CG38 1075 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 RGS2P41220 211 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 ZBED6P86452 979 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 GRM4Q14833 912 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 P3H1Q32P28 736 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 ZNF658Q5TYW1 1059 aaPredicted RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 C12orf60Q5U649 245 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 ZNF280DQ6N043 979 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 ANKRD13CQ8N6S4 541 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 FAM193BQ96PV7 902 aaPredicted RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 RMDN3Q96TC7 470 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 GIMAP4Q9NUV9 329 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 TYW1Q9NV66 732 aaKnown RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 PCDHA6Q9UN73 950 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 PCDHA8Q9Y5H6 950 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 USP42Q9H9J4 1324 aaKnown RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 FAM170AA1A519 330 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 HAUS5O94927 633 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 EIF2S1P05198 315 aaKnown RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 H2AFZP0C0S5 128 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 ATP6V1C1P21283 382 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 PSMC2P35998 433 aaKnown RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 PLTPP55058 493 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 MRPS15P82914 257 aaKnown RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 MYBPC2Q14324 1141 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 NDUFA5Q16718 116 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 H2AFVQ71UI9 128 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 PARVGQ9HBI0 331 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 EPS15L1Q9UBC2 864 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 DAGLAQ9Y4D2 1042 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 USP17L15C9J2P7 530 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 USP17L13C9JLJ4 530 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 USP17L11C9JVI0 530 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 USP17L18D6R9N7 530 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 USP17L22D6RA61 530 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 USP17L17D6RBQ6 530 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 USP17L19D6RCP7 530 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 USP17L20D6RJB6 530 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 XPOTO43592 962 aaKnown RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 MGEA5O60502 916 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 CBFA2T3O75081 653 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 AKR1B1P15121 316 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 CALB2P22676 271 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 RAP1GDS1P52306 607 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 DSG1Q02413 1049 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 RASSF7Q02833 373 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 USP17L24Q0WX57 530 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 KRT72Q14CN4 511 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 PSMD6Q15008 389 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 C1orf146Q5VVC0 180 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 USP17L6PQ6QN14 398 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 MTHFD1LQ6UB35 978 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 ZBTB8BQ8NAP8 495 aaPredicted RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 DTX3LQ8TDB6 740 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 NRBF2Q96F24 287 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 LRGUKQ96M69 825 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 NT5C1BQ96P26 610 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 TGS1Q96RS0 853 aaKnown RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 PRMT1Q99873 361 aaKnown RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 SH3GL2Q99962 352 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 RIOK1Q9BRS2 568 aaKnown RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 APOL6Q9BWW8 343 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 TMEM206Q9H813 350 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 RAVER2Q9HCJ3 691 aaKnown RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 ZNF180Q9UJW8 692 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 SNX12Q9UMY4 172 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 PCDHGC5Q9Y5F6 944 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 GIPC1O14908 333 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 KRT8P05787 483 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 TUBA4AP68366 448 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 ITGB3BPQ13352 177 aaPredicted RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 SGMS1Q86VZ5 419 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 CCDC125Q86Z20 511 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 CCT7Q99832 543 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 BHMT2Q9H2M3 363 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 PACSIN2Q9UNF0 486 aaPredicted RBP9.05□□□□□ -0.96
PBRM1-209ENST00000412587 TMED5Q9Y3A6 229 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 IQSEC2Q5JU85 1478 aa9.05□□□□□ -0.96
PBRM1-209ENST00000412587 OPLAHO14841 1288 aa9.04□□□□□ -0.96
PBRM1-209ENST00000412587 MCF2P10911 925 aa9.04□□□□□ -0.96
PBRM1-209ENST00000412587 KRT81Q14533 505 aa9.04□□□□□ -0.96
PBRM1-209ENST00000412587 RASA3Q14644 834 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms