RNA–Protein interactions for RNA: ENST00000412393.5

LINC00342-201, long intergenic non-protein coding RNA 342, humanhuman

TSL 3 BASIC

Gene LINC00342, Length 654 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-201ENST00000412393 HELLSQ9NRZ9 838 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 FLRT1Q9NZU1 646 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 CLIP2Q9UDT6 1046 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 TJP2Q9UDY2 1190 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 ADAM30Q9UKF2 790 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 OGDHLQ9ULD0 1010 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 ADAMTS5Q9UNA0 930 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 ZNF281Q9Y2X9 895 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 NR2E3Q9Y5X4 410 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 LAMA4Q16363 1823 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 MYH6P13533 1939 aa6.17□□□□□ -1.42
LINC00342-201ENST00000412393 A0A0D9SFI3 127 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 VWA5AO00534 786 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 FOXP2O15409 715 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 SLC25A27O95847 323 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 TTLL1O95922 423 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 NDUFB10O96000 172 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 PGRP06401 933 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 CELA3AP09093 270 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 FCER1AP12319 257 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 CNGA1P29973 690 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 CYP2C19P33261 490 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 STAT3P40763 770 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 ZNF445P59923 1031 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 YBX1P67809 324 aaKnown RBP6.16□□□□□ -1.42
LINC00342-201ENST00000412393 TFAP4Q01664 338 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 NUCB1Q02818 461 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 PLP2Q04941 152 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 NMIQ13287 307 aaPredicted RBP6.16□□□□□ -1.42
LINC00342-201ENST00000412393 TMEM132BQ14DG7 1078 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 ALX1Q15699 326 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 MCMDC2Q4G0Z9 681 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 FAM47AQ5JRC9 791 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 HABP4Q5JVS0 413 aaKnown RBP6.16□□□□□ -1.42
LINC00342-201ENST00000412393 VPS53Q5VIR6 699 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.16□□□□□ -1.42
LINC00342-201ENST00000412393 ZSCAN30Q86W11 494 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 TICAM2Q86XR7 235 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 ABRAQ8N0Z2 381 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 LRRC47Q8N1G4 583 aaKnown RBP6.16□□□□□ -1.42
LINC00342-201ENST00000412393 LINC01356Q8N9X3 169 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 DIS3LQ8TF46 1054 aaKnown RBP6.16□□□□□ -1.42
LINC00342-201ENST00000412393 RNF141Q8WVD5 230 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 MKL1Q969V6 931 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 RILPL2Q969X0 211 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 FAM227BQ96M60 508 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 SLF1Q9BQI6 1058 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 C22orf23Q9BZE7 217 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 SLC5A4Q9NY91 659 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 MTMR4Q9NYA4 1195 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 SYNPO2Q9UMS6 1093 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.16□□□□□ -1.42
LINC00342-201ENST00000412393 CTDP1Q9Y5B0 961 aaPredicted RBP6.16□□□□□ -1.42
LINC00342-201ENST00000412393 PLIN4Q96Q06 1357 aa6.16□□□□□ -1.42
LINC00342-201ENST00000412393 TRIOBPQ9H2D6 2365 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 RBM47A0AV96 593 aaKnown RBP6.15□□□□□ -1.42
LINC00342-201ENST00000412393 TSPY2A6NKD2 308 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 TREHO43280 583 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 ORC4O43929 436 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 RANBP6O60518 1105 aaKnown RBP6.15□□□□□ -1.42
LINC00342-201ENST00000412393 MSCO60682 206 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 ZBED4O75132 1171 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 CILPO75339 1184 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 FGAP02671 866 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 COPB2P35606 906 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 KIR2DL1P43626 348 aaPredicted RBP6.15□□□□□ -1.42
LINC00342-201ENST00000412393 KIR2DL2P43627 348 aaPredicted RBP6.15□□□□□ -1.42
LINC00342-201ENST00000412393 TEKQ02763 1124 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 PDE4CQ08493 712 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 KCTD2Q14681 263 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 SLFN13Q68D06 897 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 SNRNP48Q6IEG0 339 aaKnown RBP6.15□□□□□ -1.42
LINC00342-201ENST00000412393 CNKSR3Q6P9H4 555 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 CPXCR1Q8N123 301 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 PRPF38AQ8NAV1 312 aaKnown RBP6.15□□□□□ -1.42
LINC00342-201ENST00000412393 GMCL1P1Q8NEA9 526 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 REPS2Q8NFH8 660 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 PDLIM2Q96JY6 352 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 GBP4Q96PP9 640 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 MMP19Q99542 508 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 TEX13BQ9BXU2 312 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 C11orf49Q9H6J7 331 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 INCENPQ9NQS7 918 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 TOMM22Q9NS69 142 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 FAM8A1Q9UBU6 413 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 DDX20Q9UHI6 824 aaKnown RBP6.15□□□□□ -1.42
LINC00342-201ENST00000412393 DCTN4Q9UJW0 460 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 ANAPC4Q9UJX5 808 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 FEM1BQ9UK73 627 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 ZNF214Q9UL59 606 aaPredicted RBP6.15□□□□□ -1.42
LINC00342-201ENST00000412393 STX8Q9UNK0 236 aa6.15□□□□□ -1.42
LINC00342-201ENST00000412393 CCDC171Q6TFL3 1326 aa6.15□□□□□ -1.43
LINC00342-201ENST00000412393 PGK2P07205 417 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 FGRP09769 529 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 HSPD1P10809 573 aaKnown RBP6.14□□□□□ -1.43
LINC00342-201ENST00000412393 CYBAP13498 195 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 SDSP20132 328 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 MFAP1P55081 439 aaKnown RBP6.14□□□□□ -1.43
LINC00342-201ENST00000412393 HAND2P61296 217 aa6.14□□□□□ -1.43
LINC00342-201ENST00000412393 TMEM62Q0P6H9 643 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms