RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 GJA10Q969M2 543 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 CTNNAL1Q9UBT7 734 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 AKT3Q9Y243 479 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 BTBD18B2RXH4 712 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 MFAP3LO75121 409 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 CTSWP56202 376 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 ROR1Q01973 937 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 ARMC3Q5W041 872 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 SDE2Q6IQ49 451 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 IFNL3Q8IZI9 196 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 APOL4Q9BPW4 351 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 ROPN1BQ9BZX4 212 aaPredicted RBP7.8□□□□□ -1.16
PTPN3-203ENST00000412145 ROPN1Q9HAT0 212 aaPredicted RBP7.8□□□□□ -1.16
PTPN3-203ENST00000412145 H3BMM5 538 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 TRIM24O15164 1050 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 S100A9P06702 114 aaKnown RBP7.8□□□□□ -1.16
PTPN3-203ENST00000412145 HIST1H2AGP0C0S8 130 aaPredicted RBP7.8□□□□□ -1.16
PTPN3-203ENST00000412145 HIST1H2ADP20671 130 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 RAD23BP54727 409 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 CCDC85BQ15834 202 aaPredicted RBP7.8□□□□□ -1.16
PTPN3-203ENST00000412145 ABCB5Q2M3G0 1257 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 ALKBH5Q6P6C2 394 aaKnown RBP7.8□□□□□ -1.16
PTPN3-203ENST00000412145 NLRP14Q86W24 1093 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 LRRC49Q8IUZ0 686 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 DNAJC10Q8IXB1 793 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 RHOT1Q8IXI2 618 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 RFWD2Q8NHY2 731 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 URGCPQ8TCY9 931 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 VPS33AQ96AX1 596 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 HIST1H2AHQ96KK5 128 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 HIST1H2AJQ99878 128 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 H2AFJQ9BTM1 129 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 GMEB1Q9Y692 573 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 TGFBR2P37173 567 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 RGS4P49798 205 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 KRT76Q01546 638 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 MMRN1Q13201 1228 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 STXBP2Q15833 593 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 AGBL2Q5U5Z8 902 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 KRT78Q8N1N4 520 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 EME1Q96AY2 570 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 CARD14Q9BXL6 1004 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 NEK6Q9HC98 313 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 NCOA5Q9HCD5 579 aaKnown RBP7.8□□□□□ -1.16
PTPN3-203ENST00000412145 SOX13Q9UN79 622 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 BIVM-ERCC5R4GMW8 1640 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 CFAP99D6REC4 459 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 HSD17B4P51659 736 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 NCALDP61601 193 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 STX5Q13190 355 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 TSC22D1Q15714 1073 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 SRLQ86TD4 932 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 RHPN2Q8IUC4 686 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 SUGP1Q8IWZ8 645 aaKnown RBP7.8□□□□□ -1.16
PTPN3-203ENST00000412145 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.8□□□□□ -1.16
PTPN3-203ENST00000412145 FAM161BQ96MY7 647 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 SRPK1Q96SB4 655 aaKnown RBP7.8□□□□□ -1.16
PTPN3-203ENST00000412145 ADNPQ9H2P0 1102 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 SLC39A2Q9NP94 309 aa7.8□□□□□ -1.16
PTPN3-203ENST00000412145 SERPINB3P29508 390 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 STAT5AP42229 794 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 STAT5BP51692 787 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 RBL2Q08999 1139 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 C1DQ13901 141 aaKnown RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 COG2Q14746 738 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 INAQ16352 499 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 KLHL12Q53G59 568 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 PKN3Q6P5Z2 889 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 MOSPD2Q8NHP6 518 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 ZNF560Q96MR9 790 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SLC52A2Q9HAB3 445 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SUGCTQ9HAC7 445 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 MTMR6Q9Y217 621 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 STON1Q9Y6Q2 735 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SPACA6W5XKT8 324 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 PRPF3O43395 683 aaKnown RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SRP72O76094 671 aaKnown RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 PGM1P36871 562 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 LIFRP42702 1097 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 CCDC142Q17RM4 750 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 MAEAQ7L5Y9 396 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 CATSPER3Q86XQ3 398 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 MYLK2Q9H1R3 596 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 EPN3Q9H201 632 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 TBC1D22BQ9NU19 505 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 EIF4A3P38919 411 aaKnown RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 MAPRE1Q15691 268 aaKnown RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 ME3Q16798 604 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 KRT24Q2M2I5 525 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 SLFN13Q68D06 897 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 UGT3A1Q6NUS8 523 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 KCNV1Q6PIU1 500 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 ARMC7Q9H6L4 198 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 HMG20AQ9NP66 347 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 UBE2TQ9NPD8 197 aaPredicted RBP7.79□□□□□ -1.16
PTPN3-203ENST00000412145 MAD2L2Q9UI95 211 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 ADAM21Q9UKJ8 722 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 MYOM2P54296 1465 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 KLHL41O60662 606 aa7.79□□□□□ -1.16
PTPN3-203ENST00000412145 TKTP29401 623 aaKnown RBP7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms