RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 LPPQ93052 612 aa15.34■□□□□ 0.05
CPNE1-206ENST00000412056 ZNF689Q96CS4 500 aaPredicted RBP15.34■□□□□ 0.05
CPNE1-206ENST00000412056 CCDC51Q96ER9 411 aa15.34■□□□□ 0.05
CPNE1-206ENST00000412056 PAGE5Q96GU1 130 aa15.34■□□□□ 0.05
CPNE1-206ENST00000412056 TARS2Q9BW92 718 aaKnown RBP15.34■□□□□ 0.05
CPNE1-206ENST00000412056 SEL1LQ9UBV2 794 aa15.34■□□□□ 0.05
CPNE1-206ENST00000412056 PCDHB2Q9Y5E7 798 aa15.34■□□□□ 0.05
CPNE1-206ENST00000412056 PRR29P0C7W0 189 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 SKIP12755 728 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 STRN3Q13033 797 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 ZC2HC1CQ53FD0 456 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-206ENST00000412056 HERC4Q5GLZ8 1057 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-206ENST00000412056 CLLU1OSQ5K130 101 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 ATF7IP2Q5U623 682 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 SLC27A1Q6PCB7 646 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 SPRED2Q7Z698 418 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 FMR1NBQ8N0W7 255 aaPredicted RBP15.33■□□□□ 0.04
CPNE1-206ENST00000412056 SMG8Q8ND04 991 aaKnown RBP15.33■□□□□ 0.04
CPNE1-206ENST00000412056 CNNM3Q8NE01 707 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 ENGASEQ8NFI3 743 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 KCNN1Q92952 543 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 ACO2Q99798 780 aaKnown RBP15.33■□□□□ 0.04
CPNE1-206ENST00000412056 MRPL4Q9BYD3 311 aaKnown RBP15.33■□□□□ 0.04
CPNE1-206ENST00000412056 FGFBP2Q9BYJ0 223 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 MRPL44Q9H9J2 332 aaKnown RBP15.33■□□□□ 0.04
CPNE1-206ENST00000412056 TNFSF13BQ9Y275 285 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 HES2Q9Y543 173 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 IPPQ9Y573 584 aa15.33■□□□□ 0.04
CPNE1-206ENST00000412056 ANK1P16157 1881 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 LINC01553A4QN01 128 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 TBKBP1A7MCY6 615 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 ZNF623O75123 536 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 PPP1R37O75864 691 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 EOMESO95936 686 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 CASP5P51878 434 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 TAP1Q03518 808 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 FAM160A1Q05DH4 1040 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 SNW1Q13573 536 aaKnown RBP15.32■□□□□ 0.04
CPNE1-206ENST00000412056 PPP2R2DQ66LE6 453 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 CLEC17AQ6ZS10 378 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 UNC13DQ70J99 1090 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 ZNF720Q7Z2F6 126 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 MRPL10Q7Z7H8 261 aaKnown RBP15.32■□□□□ 0.04
CPNE1-206ENST00000412056 CMTR2Q8IYT2 770 aaKnown RBP15.32■□□□□ 0.04
CPNE1-206ENST00000412056 HELQQ8TDG4 1101 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 HPS3Q969F9 1004 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 APOL6Q9BWW8 343 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 TTYH1Q9H313 450 aaPredicted RBP15.32■□□□□ 0.04
CPNE1-206ENST00000412056 NXF3Q9H4D5 531 aaKnown RBP15.32■□□□□ 0.04
CPNE1-206ENST00000412056 ST6GALNAC4Q9H4F1 302 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 SLC28A3Q9HAS3 691 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 OLFML3Q9NRN5 406 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 RNF216Q9NWF9 866 aaPredicted RBP15.32■□□□□ 0.04
CPNE1-206ENST00000412056 HCSTQ9UBK5 93 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 TBX20Q9UMR3 447 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 ATG2AQ2TAZ0 1938 aa15.32■□□□□ 0.04
CPNE1-206ENST00000412056 PLXNA4Q9HCM2 1894 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 TMEM265A0A087WTH1 108 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 ABLIM1O14639 778 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 GTPBP6O43824 516 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-206ENST00000412056 KLRC4O43908 158 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 GCNT3O95395 438 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 MYBP10242 640 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 GTF2BQ00403 316 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 EHHADHQ08426 723 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 BTG3Q14201 252 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-206ENST00000412056 ZNF568Q3ZCX4 644 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 ZNF697Q5TEC3 545 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 AGMOQ6ZNB7 445 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 Q7L0L9 218 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 SLC17A8Q8NDX2 589 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 GLIS3Q8NEA6 775 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 BICD1Q96G01 975 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 ZBTB45Q96K62 511 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-206ENST00000412056 CASD1Q96PB1 797 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 ADPGKQ9BRR6 497 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 STRA6Q9BX79 667 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 TRIM6Q9C030 488 aaPredicted RBP15.31■□□□□ 0.04
CPNE1-206ENST00000412056 TMEM117Q9H0C3 514 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 ZNF576Q9H609 170 aa15.31■□□□□ 0.04
CPNE1-206ENST00000412056 RANBP2P49792 3224 aaKnown RBP15.31■□□□□ 0.04
CPNE1-206ENST00000412056 PVALEFA0A1B0GWK0 134 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 HOXA2O43364 376 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 PRPF40AO75400 957 aaKnown RBP15.3■□□□□ 0.04
CPNE1-206ENST00000412056 NR1I2O75469 434 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 PIGRP01833 764 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 LINC00271P0C7V0 271 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 ITGA4P13612 1032 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 PROZP22891 400 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 DCAF4L1Q3SXM0 396 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 FAM26FQ5R3K3 315 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 GPR153Q6NV75 609 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 SLC39A4Q6P5W5 647 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 ZBTB33Q86T24 672 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 MAP4K3Q8IVH8 894 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 FIBCD1Q8N539 461 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 HVCN1Q96D96 273 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 PGBD4Q96DM1 585 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 FAM161BQ96MY7 647 aa15.3■□□□□ 0.04
CPNE1-206ENST00000412056 CDT1Q9H211 546 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 195.7 ms