RNA–Protein interactions for RNA: ENST00000411938.1

LSM8-202, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

TSL 3

Gene LSM8, Length 290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-202ENST00000411938 TDGF1P13385 188 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 ATP4AP20648 1035 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 FNTBP49356 437 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 GLUD2P49448 558 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 CCR3P51677 355 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 LIMK1P53667 647 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 PDE1AP54750 535 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 NTHL1P78549 312 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 NUCB2P80303 420 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 FOXC1Q12948 553 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 SF3A2Q15428 464 aaKnown RBP7.8□□□□□ -1.16
LSM8-202ENST00000411938 STPG1Q5TH74 334 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 CEP68Q76N32 757 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 GRASPQ7Z6J2 395 aaPredicted RBP7.8□□□□□ -1.16
LSM8-202ENST00000411938 GLYCTKQ8IVS8 523 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 FGF13Q92913 245 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 MAP4K1Q92918 833 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 RILPL2Q969X0 211 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 HERC2P3Q9BVR0 1158 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 GZF1Q9H116 711 aaPredicted RBP7.8□□□□□ -1.16
LSM8-202ENST00000411938 GRPEL1Q9HAV7 217 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 RXFP1Q9HBX9 757 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 SENP2Q9HC62 589 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 AGO4Q9HCK5 861 aaKnown RBP7.8□□□□□ -1.16
LSM8-202ENST00000411938 CHST12Q9NRB3 414 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 CEP131Q9UPN4 1083 aa7.8□□□□□ -1.16
LSM8-202ENST00000411938 PRG3Q9Y2Y8 225 aaPredicted RBP7.8□□□□□ -1.16
LSM8-202ENST00000411938 SPEGQ15772 3267 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 ASXL3Q9C0F0 2248 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 NRP1O14786 923 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 TGM5O43548 720 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 ZMYND10O75800 440 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 SPINK2P20155 84 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 CXCL12P48061 93 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 RAB27AP51159 221 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 GPC3P51654 580 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 TROAPQ12815 778 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 TRDNQ13061 729 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 FZD5Q13467 585 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 CCDC6Q16204 474 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 CEP55Q53EZ4 464 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 HEATR6Q6AI08 1181 aaKnown RBP7.79□□□□□ -1.16
LSM8-202ENST00000411938 PSAPL1Q6NUJ1 521 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 CATIPQ7Z7H3 387 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 TICAM2Q86XR7 235 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 FAM160A2Q8N612 972 aaPredicted RBP7.79□□□□□ -1.16
LSM8-202ENST00000411938 ZCCHC14Q8WYQ9 949 aaKnown RBP7.79□□□□□ -1.16
LSM8-202ENST00000411938 PGBD4Q96DM1 585 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 TMEM175Q9BSA9 504 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 LSM14BQ9BX40 385 aaKnown RBP7.79□□□□□ -1.16
LSM8-202ENST00000411938 SPZ1Q9BXG8 430 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 PANK2Q9BZ23 570 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 GCOM2Q9BZD3 368 aaPredicted RBP7.79□□□□□ -1.16
LSM8-202ENST00000411938 CHRDQ9H2X0 955 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 HEBP1Q9NRV9 189 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 FOXD4L1Q9NU39 408 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 FAM105AQ9NUU6 356 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 KANSL3Q9P2N6 904 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 POLIQ9UNA4 740 aa7.79□□□□□ -1.16
LSM8-202ENST00000411938 PIN4Q9Y237 131 aaKnown RBP7.79□□□□□ -1.16
LSM8-202ENST00000411938 IGSF10Q6WRI0 2623 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 MEIS1O00470 390 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 MAN2B1O00754 1011 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 AXIN1O15169 862 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 ZNF623O75123 536 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 PAPLNO95428 1278 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 BAG4O95429 457 aaKnown RBP7.78□□□□□ -1.16
LSM8-202ENST00000411938 POMCP01189 267 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 RPL17P18621 184 aaKnown RBP7.78□□□□□ -1.16
LSM8-202ENST00000411938 SFPQP23246 707 aaKnown RBP eCLIP7.78□□□□□ -1.16
LSM8-202ENST00000411938 CNR2P34972 360 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 ZNF76P36508 570 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 OR1G1P47890 313 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 NOVA1P51513 510 aaKnown RBP7.78□□□□□ -1.16
LSM8-202ENST00000411938 AFF1P51825 1210 aaKnown RBP7.78□□□□□ -1.16
LSM8-202ENST00000411938 SATB1Q01826 763 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 DSG1Q02413 1049 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 KLHL40Q2TBA0 621 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 CWC27Q6UX04 472 aaKnown RBP7.78□□□□□ -1.16
LSM8-202ENST00000411938 MAMSTRQ6ZN01 415 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 LINC01465Q8N7H1 131 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 CTCFLQ8NI51 663 aaPredicted RBP7.78□□□□□ -1.16
LSM8-202ENST00000411938 ITFG1Q8TB96 612 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 KIF12Q96FN5 646 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 B3GALT6Q96L58 329 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 IER2Q9BTL4 223 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 TRAIPQ9BWF2 469 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 ADAM33Q9BZ11 813 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 ARRDC1-AS1Q9H2J1 176 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 LMAN1LQ9HAT1 526 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 LY9Q9HBG7 655 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 RRAGDQ9NQL2 400 aaPredicted RBP7.78□□□□□ -1.16
LSM8-202ENST00000411938 RXFP3Q9NSD7 469 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 GABBR1Q9UBS5 961 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 TCEAL9Q9UHQ7 104 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 PCDHB2Q9Y5E7 798 aa7.78□□□□□ -1.16
LSM8-202ENST00000411938 MAFBQ9Y5Q3 323 aaPredicted RBP7.78□□□□□ -1.16
LSM8-202ENST00000411938 ASPMQ8IZT6 3477 aa7.77□□□□□ -1.16
LSM8-202ENST00000411938 hCG_1642624A0A1W2PR95 340 aa7.77□□□□□ -1.17
LSM8-202ENST00000411938 TAF4O00268 1085 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms