RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 ZNF623O75123 536 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 TBCAO75347 108 aaKnown RBP13.18□□□□□ -0.3
NEDD1-202ENST00000411739 OFD1O75665 1012 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 POMCP01189 267 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 HARSP12081 509 aaKnown RBP13.18□□□□□ -0.3
NEDD1-202ENST00000411739 ITGA4P13612 1032 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 IDEP14735 1019 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 EFNA5P52803 228 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 SMTNP53814 917 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 GPM6BQ13491 265 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 FAM187BQ17R55 369 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 ZC2HC1CQ53FD0 456 aaPredicted RBP13.18□□□□□ -0.3
NEDD1-202ENST00000411739 SLC27A1Q6PCB7 646 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 DNAJC19Q96DA6 116 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 ZFP42Q96MM3 310 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 IKZF4Q9H2S9 585 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 CWH43Q9H720 699 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 PARVGQ9HBI0 331 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 FAM13BQ9NYF5 915 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 LARSQ9P2J5 1176 aaKnown RBP13.18□□□□□ -0.3
NEDD1-202ENST00000411739 PARP2Q9UGN5 583 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 ODF2LQ9ULJ1 636 aa13.18□□□□□ -0.3
NEDD1-202ENST00000411739 MYH11P35749 1972 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 NT5C1B-RDH14C9J2C7 533 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 AFMP43652 599 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 RAB27AP51159 221 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 OSTNP61366 133 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 ATF7IP2Q5U623 682 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 HAUS6Q7Z4H7 955 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 MRPL10Q7Z7H8 261 aaKnown RBP13.17□□□□□ -0.3
NEDD1-202ENST00000411739 SFR1Q86XK3 245 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 SPIRE2Q8WWL2 714 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 HPS3Q969F9 1004 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 PRIMPOLQ96LW4 560 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 GAD1Q99259 594 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 NTPCRQ9BSD7 190 aaKnown RBP13.17□□□□□ -0.3
NEDD1-202ENST00000411739 BLZF1Q9H2G9 400 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 MIOSQ9NXC5 875 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 SNTG2Q9NY99 539 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 SERTAD1Q9UHV2 236 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 KCNH3Q9ULD8 1083 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 PRRC2BQ5JSZ5 2229 aaKnown RBP13.17□□□□□ -0.3
NEDD1-202ENST00000411739 MYO7AQ13402 2215 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 K7ENM7 598 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 GRM6O15303 877 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 TRAK2O60296 914 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 B4GALT3O60512 393 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 MAPTP10636 758 aaKnown RBP13.17□□□□□ -0.3
NEDD1-202ENST00000411739 SKIP12755 728 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 PFKFB1P16118 471 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 MLH1P40692 756 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 PCBP1Q15365 356 aaKnown RBP eCLIP13.17□□□□□ -0.3
NEDD1-202ENST00000411739 GLB1LQ6UWU2 654 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 ZNF280BQ86YH2 543 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 IQUBQ8NA54 791 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 KLHL23Q8NBE8 558 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 CLP1Q92989 425 aaKnown RBP13.17□□□□□ -0.3
NEDD1-202ENST00000411739 PGBD4Q96DM1 585 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 ACO2Q99798 780 aaKnown RBP13.17□□□□□ -0.3
NEDD1-202ENST00000411739 FGFBP2Q9BYJ0 223 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 RSAD1Q9HA92 442 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 C17orf75Q9HAS0 396 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 STXBP5LQ9Y2K9 1186 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 GDAQ9Y2T3 454 aa13.17□□□□□ -0.3
NEDD1-202ENST00000411739 ZNF131P52739 623 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 SEZ6Q53EL9 994 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 NOMO2Q5JPE7 1267 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 ADALQ6DHV7 355 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 CEP120Q8N960 986 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 FIZ1Q96SL8 496 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 TCHPQ9BT92 498 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 SCAND2PQ9GZW5 306 aaPredicted RBP13.16□□□□□ -0.3
NEDD1-202ENST00000411739 GOLPH3LQ9H4A5 285 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 TMEM134Q9H6X4 195 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 TBC1D13Q9NVG8 400 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 RBM19Q9Y4C8 960 aaKnown RBP13.16□□□□□ -0.3
NEDD1-202ENST00000411739 PHLPP2Q6ZVD8 1323 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 N4BP3O15049 544 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 HOXA2O43364 376 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 SLC34A2O95436 690 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 NCKAP1LP55160 1127 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 FAM178BQ8IXR5 827 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 MAFAQ8NHW3 353 aaPredicted RBP13.16□□□□□ -0.3
NEDD1-202ENST00000411739 RABGGTAQ92696 567 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 MRPL4Q9BYD3 311 aaKnown RBP13.16□□□□□ -0.3
NEDD1-202ENST00000411739 RNF216Q9NWF9 866 aaPredicted RBP13.16□□□□□ -0.3
NEDD1-202ENST00000411739 ANKFY1Q9P2R3 1169 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 DNAJB4Q9UDY4 337 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 MTCH2Q9Y6C9 303 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 TRANK1O15050 2925 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 REV3LO60673 3130 aa13.16□□□□□ -0.3
NEDD1-202ENST00000411739 ARL5CA6NH57 179 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 H3BNC9 293 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 ZC3H11AO75152 810 aaKnown RBP eCLIP13.15□□□□□ -0.3
NEDD1-202ENST00000411739 DDHD2O94830 711 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 ITGB1P05556 798 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 CMA1P23946 247 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 DNAJB1P25685 340 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 SCNN1GP51170 649 aa13.15□□□□□ -0.3
NEDD1-202ENST00000411739 NDUFA8P51970 172 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms