RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 PCDHA10Q9Y5I2 948 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 MAST4O15021 2626 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 HELZ2Q9BYK8 2649 aaKnown RBP2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 DNAH14Q0VDD8 3507 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 CNTNAP2Q9UHC6 1331 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 APC2O95996 2303 aa2.67□□□□□ -1.98
RNU4-53P-201ENST00000410828 ATG2AQ2TAZ0 1938 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 hCG_1642624A0A1W2PR95 340 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 TMEM8BA6NDV4 472 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 SMCO2A6NFE2 343 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 CCDC69A6NI79 296 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 WDR64B1ANS9 1081 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 C1QTNF9BB2RNN3 333 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 E7EWF7 191 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAM86B1E9PN63 330 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 hCG_1984214I3L0E3 225 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 TM4SF5O14894 197 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 HRO43593 1189 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF862O60290 1169 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 B4GALT3O60512 393 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 ECI2O75521 394 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 PLEKHA8P1O95397 391 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 EFEMP2O95967 443 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 CYP3A4P08684 503 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAM86B2P0C5J1 330 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 C1QTNF9P0C862 333 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 TDGF1P13385 188 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 ITGA4P13612 1032 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 NCLP19338 710 aaKnown RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 HOXA9P31269 272 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 SFNP31947 248 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 AFF1P51825 1210 aaKnown RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 ADCY7P51828 1080 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 JAK3P52333 1124 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 NAPAP54920 295 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 ANTXR2P58335 489 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 NTHL1P78549 312 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 PRKCEQ02156 737 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 NCBP1Q09161 790 aaKnown RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 FZD5Q13467 585 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 HDAC1Q13547 482 aaPredicted RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 TARBP2Q15633 366 aaKnown RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 UVSSAQ2YD98 709 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 USP41Q3LFD5 358 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 PABPC1LQ4VXU2 614 aaKnown RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 XKR3Q5GH77 459 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 PPM1LQ5SGD2 360 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 LIN9Q5TKA1 542 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 PPP1R18Q6NYC8 613 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 FUT10Q6P4F1 479 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 PDXDC1Q6P996 788 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 LILRA6Q6PI73 481 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 CASC1Q6TDU7 716 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 LRSAM1Q6UWE0 723 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 UNQ6494/PRO21346Q6UXR6 183 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 SYNE3Q6ZMZ3 975 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 AGMOQ6ZNB7 445 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 CEP68Q76N32 757 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 RTL10Q7L3V2 364 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 TAS1R1Q7RTX1 841 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 MRPL10Q7Z7H8 261 aaKnown RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 LONP2Q86WA8 852 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 RHPN2Q8IUC4 686 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 GLYCTKQ8IVS8 523 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 NPAS3Q8IXF0 933 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 COLGALT2Q8IYK4 626 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 RNF168Q8IYW5 571 aaPredicted RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 CMTR1Q8N1G2 835 aaKnown RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 SPEM1Q8N4L4 309 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 CCDC82Q8N4S0 544 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 ZNF713Q8N859 430 aaPredicted RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 C12orf50Q8NA57 414 aaPredicted RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 KDF1Q8NAX2 398 aaPredicted RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 FANCBQ8NB91 859 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 CNNM3Q8NE01 707 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 FAM3CQ92520 227 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 DNASE1L2Q92874 299 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 TMEM87BQ96K49 555 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 MBOAT7Q96N66 472 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 KXD1Q9BQD3 176 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 JPH2Q9BR39 696 aaPredicted RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 MTA3Q9BTC8 594 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 LNPKQ9C0E8 428 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 OSBPL3Q9H4L5 887 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 BRD9Q9H8M2 597 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 LMAN1LQ9HAT1 526 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 RIC8AQ9NPQ8 531 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 DISC1Q9NRI5 854 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 HEBP1Q9NRV9 189 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 CHST7Q9NS84 486 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 AGPAT5Q9NUQ2 364 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 MARCH5Q9NX47 278 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 GDE1Q9NZC3 331 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 SUCLA2Q9P2R7 463 aaPredicted RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 NDRG2Q9UN36 371 aaKnown RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 MRPS23Q9Y3D9 190 aaKnown RBP2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 SLC12A7Q9Y666 1083 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 KNTC1P50748 2209 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 PLXNA4Q9HCM2 1894 aa2.66□□□□□ -1.98
RNU4-53P-201ENST00000410828 URB1O60287 2271 aaKnown RBP2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms