RNA–Protein interactions for RNA: ENST00000410062.8

UBE2E3-202, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2E3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-202ENST00000410062 HAUS6Q7Z4H7 955 aa26.23■■□□□ 1.79
UBE2E3-202ENST00000410062 MRPL10Q7Z7H8 261 aaKnown RBP26.23■■□□□ 1.79
UBE2E3-202ENST00000410062 SFR1Q86XK3 245 aa26.23■■□□□ 1.79
UBE2E3-202ENST00000410062 FAM178BQ8IXR5 827 aa26.23■■□□□ 1.79
UBE2E3-202ENST00000410062 ABI1Q8IZP0 508 aa26.23■■□□□ 1.79
UBE2E3-202ENST00000410062 FSIP1Q8NA03 581 aa26.23■■□□□ 1.79
UBE2E3-202ENST00000410062 PGBD4Q96DM1 585 aa26.23■■□□□ 1.79
UBE2E3-202ENST00000410062 FIZ1Q96SL8 496 aa26.23■■□□□ 1.79
UBE2E3-202ENST00000410062 PYM1Q9BRP8 204 aaKnown RBP26.23■■□□□ 1.79
UBE2E3-202ENST00000410062 TMEM117Q9H0C3 514 aa26.23■■□□□ 1.79
UBE2E3-202ENST00000410062 SERTAD1Q9UHV2 236 aa26.23■■□□□ 1.79
UBE2E3-202ENST00000410062 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.22■■□□□ 1.79
UBE2E3-202ENST00000410062 K7ENM7 598 aa26.22■■□□□ 1.79
UBE2E3-202ENST00000410062 RFXAPO00287 272 aa26.22■■□□□ 1.79
UBE2E3-202ENST00000410062 N4BP3O15049 544 aa26.22■■□□□ 1.79
UBE2E3-202ENST00000410062 NMT1P30419 496 aaKnown RBP26.22■■□□□ 1.79
UBE2E3-202ENST00000410062 ATF7IP2Q5U623 682 aa26.22■■□□□ 1.79
UBE2E3-202ENST00000410062 EEF1DP3Q658K8 133 aa26.22■■□□□ 1.79
UBE2E3-202ENST00000410062 AGMOQ6ZNB7 445 aa26.22■■□□□ 1.79
UBE2E3-202ENST00000410062 CDX2Q99626 313 aaPredicted RBP26.22■■□□□ 1.79
UBE2E3-202ENST00000410062 LRRC27Q9C0I9 530 aa26.22■■□□□ 1.79
UBE2E3-202ENST00000410062 GOLPH3LQ9H4A5 285 aa26.22■■□□□ 1.79
UBE2E3-202ENST00000410062 HCSTQ9UBK5 93 aa26.22■■□□□ 1.79
UBE2E3-202ENST00000410062 NLRC5Q86WI3 1866 aa26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 LINC00271P0C7V0 271 aa26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 AMPD3Q01432 767 aa26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 STRN3Q13033 797 aa26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 CEP57L1Q8IYX8 460 aa26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 MRPS27Q92552 414 aaKnown RBP26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 TARS2Q9BW92 718 aaKnown RBP26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 APOL6Q9BWW8 343 aa26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 MRPL4Q9BYD3 311 aaKnown RBP26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 TRIM9Q9C026 710 aa26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 RNF39Q9H2S5 420 aa26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 NXF3Q9H4D5 531 aaKnown RBP26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 MAGEF1Q9HAY2 307 aa26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 TRANK1O15050 2925 aa26.21■■□□□ 1.79
UBE2E3-202ENST00000410062 FAM237AA0A1B0GTK4 181 aa26.2■■□□□ 1.79
UBE2E3-202ENST00000410062 H0YCG3 227 aa26.2■■□□□ 1.79
UBE2E3-202ENST00000410062 ACTN4O43707 911 aaKnown RBP26.2■■□□□ 1.79
UBE2E3-202ENST00000410062 SYKP43405 635 aa26.2■■□□□ 1.79
UBE2E3-202ENST00000410062 AFMP43652 599 aa26.2■■□□□ 1.79
UBE2E3-202ENST00000410062 CNNM3Q8NE01 707 aa26.2■■□□□ 1.79
UBE2E3-202ENST00000410062 IPO9Q96P70 1041 aaKnown RBP26.2■■□□□ 1.79
UBE2E3-202ENST00000410062 ACO2Q99798 780 aaKnown RBP26.2■■□□□ 1.79
UBE2E3-202ENST00000410062 PANK4Q9NVE7 773 aa26.2■■□□□ 1.79
UBE2E3-202ENST00000410062 TBC1D7Q9P0N9 293 aa26.2■■□□□ 1.79
UBE2E3-202ENST00000410062 SLFN14P0C7P3 912 aa26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 ITGA4P13612 1032 aa26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 CASP1P29466 404 aa26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 EPC2Q52LR7 807 aa26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 LRRC55Q6ZSA7 311 aa26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 TMEM192Q8IY95 271 aa26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 GRAMD1CQ8IYS0 662 aa26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 MYLIPQ8WY64 445 aa26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 CLP1Q92989 425 aaKnown RBP26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 ADPGKQ9BRR6 497 aa26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 BLZF1Q9H2G9 400 aa26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 TYW1Q9NV66 732 aaKnown RBP26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 INPP5FQ9Y2H2 1132 aa26.2■■□□□ 1.78
UBE2E3-202ENST00000410062 KIAA1671Q9BY89 1806 aa26.19■■□□□ 1.78
UBE2E3-202ENST00000410062 FRMD3A2A2Y4 597 aa26.19■■□□□ 1.78
UBE2E3-202ENST00000410062 OFD1O75665 1012 aa26.19■■□□□ 1.78
UBE2E3-202ENST00000410062 GAP43P17677 238 aa26.19■■□□□ 1.78
UBE2E3-202ENST00000410062 ZC2HC1CQ53FD0 456 aaPredicted RBP26.19■■□□□ 1.78
UBE2E3-202ENST00000410062 HERC4Q5GLZ8 1057 aaPredicted RBP26.19■■□□□ 1.78
UBE2E3-202ENST00000410062 GLB1LQ6UWU2 654 aa26.19■■□□□ 1.78
UBE2E3-202ENST00000410062 RSAD1Q9HA92 442 aa26.19■■□□□ 1.78
UBE2E3-202ENST00000410062 TNFSF13BQ9Y275 285 aa26.19■■□□□ 1.78
UBE2E3-202ENST00000410062 RALGAPA2Q2PPJ7 1873 aa26.18■■□□□ 1.78
UBE2E3-202ENST00000410062 GOLGA6L4A6NEF3 574 aa26.18■■□□□ 1.78
UBE2E3-202ENST00000410062 AKAP5P24588 427 aa26.18■■□□□ 1.78
UBE2E3-202ENST00000410062 CTNNB1P35222 781 aa26.18■■□□□ 1.78
UBE2E3-202ENST00000410062 AFF1P51825 1210 aaKnown RBP26.18■■□□□ 1.78
UBE2E3-202ENST00000410062 ASIC1P78348 528 aa26.18■■□□□ 1.78
UBE2E3-202ENST00000410062 SPOUT1Q5T280 376 aaKnown RBP26.18■■□□□ 1.78
UBE2E3-202ENST00000410062 FBXO22Q8NEZ5 403 aa26.18■■□□□ 1.78
UBE2E3-202ENST00000410062 C7orf25Q9BPX7 421 aa26.18■■□□□ 1.78
UBE2E3-202ENST00000410062 MRPL44Q9H9J2 332 aaKnown RBP26.18■■□□□ 1.78
UBE2E3-202ENST00000410062 SEL1LQ9UBV2 794 aa26.18■■□□□ 1.78
UBE2E3-202ENST00000410062 TBX20Q9UMR3 447 aa26.18■■□□□ 1.78
UBE2E3-202ENST00000410062 ZNF720Q7Z2F6 126 aa26.17■■□□□ 1.78
UBE2E3-202ENST00000410062 CCDC65Q8IXS2 484 aa26.17■■□□□ 1.78
UBE2E3-202ENST00000410062 LRRC43Q8N309 656 aa26.17■■□□□ 1.78
UBE2E3-202ENST00000410062 GDPD5Q8WTR4 605 aa26.17■■□□□ 1.78
UBE2E3-202ENST00000410062 KCNN1Q92952 543 aa26.17■■□□□ 1.78
UBE2E3-202ENST00000410062 PAGE5Q96GU1 130 aa26.17■■□□□ 1.78
UBE2E3-202ENST00000410062 SAMD11Q96NU1 681 aa26.17■■□□□ 1.78
UBE2E3-202ENST00000410062 CWH43Q9H720 699 aa26.17■■□□□ 1.78
UBE2E3-202ENST00000410062 PTPRHQ9HD43 1115 aa26.17■■□□□ 1.78
UBE2E3-202ENST00000410062 EYSQ5T1H1 3165 aa26.17■■□□□ 1.78
UBE2E3-202ENST00000410062 BMPR1AP36894 532 aa26.16■■□□□ 1.78
UBE2E3-202ENST00000410062 GTF2BQ00403 316 aa26.16■■□□□ 1.78
UBE2E3-202ENST00000410062 CUL4BQ13620 913 aa26.16■■□□□ 1.78
UBE2E3-202ENST00000410062 ZNF568Q3ZCX4 644 aa26.16■■□□□ 1.78
UBE2E3-202ENST00000410062 NOMO2Q5JPE7 1267 aa26.16■■□□□ 1.78
UBE2E3-202ENST00000410062 CNNM4Q6P4Q7 775 aa26.16■■□□□ 1.78
UBE2E3-202ENST00000410062 ZBTB33Q86T24 672 aa26.16■■□□□ 1.78
UBE2E3-202ENST00000410062 HACE1Q8IYU2 909 aa26.16■■□□□ 1.78
UBE2E3-202ENST00000410062 BICD1Q96G01 975 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms