RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 MCOLN1Q9GZU1 580 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 SEMA4AQ9H3S1 761 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 KCNK12Q9HB15 430 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 IFT122Q9HBG6 1241 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 MAGED2Q9UNF1 606 aaPredicted RBP5.81□□□□□ -1.48
LSM5-205ENST00000409952 LIMCH1Q9UPQ0 1083 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 CRYL1Q9Y2S2 319 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 ATP23Q9Y6H3 246 aa5.81□□□□□ -1.48
LSM5-205ENST00000409952 POM121BA6NF01 834 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 DBX1A6NMT0 343 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 NKRFO15226 690 aaKnown RBP eCLIP5.8□□□□□ -1.48
LSM5-205ENST00000409952 MAFKO60675 156 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 FGF18O76093 207 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 LPLP06858 475 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 TSHRP16473 764 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 CAPN3P20807 821 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 RRM1P23921 792 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 EDNRBP24530 442 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 GALK1P51570 392 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 CORO7P57737 925 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 MVKQ03426 396 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 MYBPC2Q14324 1141 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 SEC23AQ15436 765 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 LCE4AQ5TA78 99 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 C16orf54Q6UWD8 224 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 KRT77Q7Z794 578 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 C7orf31Q8N865 590 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 RPGRQ92834 1020 aaKnown RBP5.8□□□□□ -1.48
LSM5-205ENST00000409952 SEC62Q99442 399 aaKnown RBP5.8□□□□□ -1.48
LSM5-205ENST00000409952 PTPN18Q99952 460 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 TMEM120AQ9BXJ8 343 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 KCTD10Q9H3F6 313 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 EPB41L1Q9H4G0 881 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 TNFRSF12AQ9NP84 129 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 CD320Q9NPF0 282 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 SMC4Q9NTJ3 1288 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 TAF6LQ9Y6J9 622 aa5.8□□□□□ -1.48
LSM5-205ENST00000409952 A0A088AWK7 358 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 TEX51A0A1B0GUA7 166 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 A6NCN8 305 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 OR14I1A6ND48 311 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 K7ENM7 598 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 EYA2O00167 538 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 FFAR2O15552 330 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 SEMA7AO75326 666 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 SKAP2O75563 359 aaPredicted RBP5.79□□□□□ -1.48
LSM5-205ENST00000409952 BAIAP3O94812 1187 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 SDHAP31040 664 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 ARL4CP56559 192 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 NUCB1Q02818 461 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 TAF12Q16514 161 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 VPS53Q5VIR6 699 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 HIBCHQ6NVY1 386 aaPredicted RBP5.79□□□□□ -1.48
LSM5-205ENST00000409952 PDXDC1Q6P996 788 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 RFX8Q6ZV50 586 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 CEP68Q76N32 757 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 COL23A1Q86Y22 540 aaPredicted RBP5.79□□□□□ -1.48
LSM5-205ENST00000409952 PHYKPLQ8IUZ5 450 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 COLGALT2Q8IYK4 626 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 CACNA2D3Q8IZS8 1091 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 FAM26EQ8N5C1 309 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 TSPEARQ8WU66 669 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.79□□□□□ -1.48
LSM5-205ENST00000409952 DPF3Q92784 378 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 FERMT2Q96AC1 680 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 ZSCAN31Q96LW9 406 aaPredicted RBP5.79□□□□□ -1.48
LSM5-205ENST00000409952 COLEC11Q9BWP8 271 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 SLC26A6Q9BXS9 759 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 ACE2Q9BYF1 805 aaPredicted RBP5.79□□□□□ -1.48
LSM5-205ENST00000409952 UNKQ9C0B0 810 aaKnown RBP5.79□□□□□ -1.48
LSM5-205ENST00000409952 GCM1Q9NP62 436 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 PNPLA8Q9NP80 782 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 BLOC1S4Q9NUP1 217 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 BTG4Q9NY30 223 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 IMPACTQ9P2X3 320 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 DPP7Q9UHL4 492 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 DSEQ9UL01 958 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 NOL7Q9UMY1 257 aaKnown RBP5.79□□□□□ -1.48
LSM5-205ENST00000409952 NR2E3Q9Y5X4 410 aa5.79□□□□□ -1.48
LSM5-205ENST00000409952 CFAP20Q9Y6A4 193 aaKnown RBP5.79□□□□□ -1.48
LSM5-205ENST00000409952 PRSS38A1L453 326 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 EIF3FO00303 357 aaPredicted RBP5.78□□□□□ -1.48
LSM5-205ENST00000409952 ETV2O00321 342 aaPredicted RBP5.78□□□□□ -1.48
LSM5-205ENST00000409952 DDX3XO00571 662 aaKnown RBP eCLIP5.78□□□□□ -1.482e-12■■■■□ 20.9
LSM5-205ENST00000409952 DGKIO75912 1065 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 CD4P01730 458 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 THP07101 528 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 IFIT1P09914 478 aaKnown RBP5.78□□□□□ -1.48
LSM5-205ENST00000409952 MSL3P1P0C860 447 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 C1QTNF9P0C862 333 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 PRKCAP17252 672 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 PDIA3P30101 505 aaKnown RBP5.78□□□□□ -1.48
LSM5-205ENST00000409952 GJA4P35212 333 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 WASP42768 502 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 HSPA7P48741 367 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 RAB1AP62820 205 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 PRKG2Q13237 762 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 PMS2P11Q13670 270 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 PRKG1Q13976 671 aa5.78□□□□□ -1.48
LSM5-205ENST00000409952 C3orf36Q3SXR2 165 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms