RNA–Protein interactions for RNA: ENST00000409498.6

SUMO1-207, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 3 BASIC

Gene SUMO1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-207ENST00000409498 TBX20Q9UMR3 447 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 PCDHB2Q9Y5E7 798 aa16.25■□□□□ 0.19
SUMO1-207ENST00000409498 K7ENM7 598 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 ABLIM1O14639 778 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 HOXA2O43364 376 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 KLRC4O43908 158 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 UPP2O95045 317 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 IDEP14735 1019 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 NMT1P30419 496 aaKnown RBP16.24■□□□□ 0.19
SUMO1-207ENST00000409498 PBX2P40425 430 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 AFMP43652 599 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 FXR1P51114 621 aaKnown RBP eCLIP16.24■□□□□ 0.19
SUMO1-207ENST00000409498 RABGGTBP53611 331 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 STRN3Q13033 797 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 COASYQ13057 564 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 ALCAMQ13740 583 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 MAP4K3Q8IVH8 894 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 CMTR2Q8IYT2 770 aaKnown RBP16.24■□□□□ 0.19
SUMO1-207ENST00000409498 SMG8Q8ND04 991 aaKnown RBP16.24■□□□□ 0.19
SUMO1-207ENST00000409498 PGBD4Q96DM1 585 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 CCDC34Q96HJ3 373 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 ZBED2Q9BTP6 218 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 ZHX3Q9H4I2 956 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 LRFN2Q9ULH4 789 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 YBX2Q9Y2T7 364 aaKnown RBP16.24■□□□□ 0.19
SUMO1-207ENST00000409498 FNDC1Q4ZHG4 1894 aaPredicted RBP16.24■□□□□ 0.19
SUMO1-207ENST00000409498 ZMYM2Q9UBW7 1377 aa16.24■□□□□ 0.19
SUMO1-207ENST00000409498 INPPL1O15357 1258 aa16.23■□□□□ 0.19
SUMO1-207ENST00000409498 DNAJB2P25686 324 aa16.23■□□□□ 0.19
SUMO1-207ENST00000409498 ASIC1P78348 528 aa16.23■□□□□ 0.19
SUMO1-207ENST00000409498 DPYDQ12882 1025 aa16.23■□□□□ 0.19
SUMO1-207ENST00000409498 ATF7IP2Q5U623 682 aa16.23■□□□□ 0.19
SUMO1-207ENST00000409498 GRAMD1CQ8IYS0 662 aa16.23■□□□□ 0.19
SUMO1-207ENST00000409498 TIFAQ96CG3 184 aa16.23■□□□□ 0.19
SUMO1-207ENST00000409498 EIF2AQ9BY44 585 aaKnown RBP16.23■□□□□ 0.19
SUMO1-207ENST00000409498 BLZF1Q9H2G9 400 aa16.23■□□□□ 0.19
SUMO1-207ENST00000409498 MRPL44Q9H9J2 332 aaKnown RBP16.23■□□□□ 0.19
SUMO1-207ENST00000409498 UBN1Q9NPG3 1134 aa16.23■□□□□ 0.19
SUMO1-207ENST00000409498 IPPQ9Y573 584 aa16.23■□□□□ 0.19
SUMO1-207ENST00000409498 PCDHB13Q9Y5F0 798 aa16.23■□□□□ 0.19
SUMO1-207ENST00000409498 LAMA3Q16787 3333 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 PRPF40AO75400 957 aaKnown RBP16.22■□□□□ 0.19
SUMO1-207ENST00000409498 NR1I2O75469 434 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 TOM1L1O75674 476 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 LIG1P18858 919 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 CASP1P29466 404 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 PSMD2Q13200 908 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 DCAF4L1Q3SXM0 396 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 EEF1DP3Q658K8 133 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 AGMOQ6ZNB7 445 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 EPM2AIP1Q7L775 607 aaPredicted RBP16.22■□□□□ 0.19
SUMO1-207ENST00000409498 LRCH3Q96II8 777 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 CASD1Q96PB1 797 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 GBP4Q96PP9 640 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 YME1L1Q96TA2 773 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 ADPGKQ9BRR6 497 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 TARS2Q9BW92 718 aaKnown RBP16.22■□□□□ 0.19
SUMO1-207ENST00000409498 TMEM117Q9H0C3 514 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 STYXL1Q9Y6J8 313 aa16.22■□□□□ 0.19
SUMO1-207ENST00000409498 LCHNA4D1U4 455 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 EIF3DO15371 548 aaKnown RBP eCLIP16.21■□□□□ 0.19
SUMO1-207ENST00000409498 CA3P07451 260 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 LINC00271P0C7V0 271 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 MYOGP15173 224 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 KCNB1Q14721 858 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 ZC2HC1CQ53FD0 456 aaPredicted RBP16.21■□□□□ 0.19
SUMO1-207ENST00000409498 CLLU1OSQ5K130 101 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 FAM26FQ5R3K3 315 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 L1TD1Q5T7N2 865 aaKnown RBP16.21■□□□□ 0.19
SUMO1-207ENST00000409498 FAM117BQ6P1L5 589 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 MPZL3Q6UWV2 235 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 APBB1IPQ7Z5R6 666 aaPredicted RBP16.21■□□□□ 0.19
SUMO1-207ENST00000409498 CDR2LQ86X02 465 aaPredicted RBP16.21■□□□□ 0.19
SUMO1-207ENST00000409498 SPATA20Q8TB22 786 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 ZNF507Q8TCN5 953 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 CLP1Q92989 425 aaKnown RBP16.21■□□□□ 0.19
SUMO1-207ENST00000409498 NKX2-4Q9H2Z4 354 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 USP20Q9Y2K6 914 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 GIT1Q9Y2X7 761 aa16.21■□□□□ 0.19
SUMO1-207ENST00000409498 LINC01553A4QN01 128 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 OFD1O75665 1012 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 RHOBTB3O94955 611 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 NPTXRO95502 500 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 PRR29P0C7W0 189 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 MCF2P10911 925 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 FGFR1P11362 822 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 CASP5P51878 434 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 TAP1Q03518 808 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 MCL1Q07820 350 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 POSTNQ15063 836 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 KMT5BQ4FZB7 885 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 STXBP4Q6ZWJ1 553 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 HACE1Q8IYU2 909 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 FGFBP2Q9BYJ0 223 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 TRIM6Q9C030 488 aaPredicted RBP16.2■□□□□ 0.18
SUMO1-207ENST00000409498 CDT1Q9H211 546 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 TMEM206Q9H813 350 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 SLC28A3Q9HAS3 691 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 LMBRD1Q9NUN5 540 aa16.2■□□□□ 0.18
SUMO1-207ENST00000409498 TBC1D7Q9P0N9 293 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms