RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 RWDD3Q9Y3V2 267 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 IPPQ9Y573 584 aa21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 MRPL42Q9Y6G3 142 aaKnown RBP21.83■■□□□ 1.09
PDLIM2-207ENST00000409417 TRANK1O15050 2925 aa21.83■■□□□ 1.08
PDLIM2-207ENST00000409417 PFKFB1P16118 471 aa21.83■■□□□ 1.08
PDLIM2-207ENST00000409417 LONRF3Q496Y0 759 aa21.83■■□□□ 1.08
PDLIM2-207ENST00000409417 ATF7IP2Q5U623 682 aa21.83■■□□□ 1.08
PDLIM2-207ENST00000409417 GLB1LQ6UWU2 654 aa21.83■■□□□ 1.08
PDLIM2-207ENST00000409417 HAUS6Q7Z4H7 955 aa21.83■■□□□ 1.08
PDLIM2-207ENST00000409417 CDR2LQ86X02 465 aaPredicted RBP21.83■■□□□ 1.08
PDLIM2-207ENST00000409417 SLC17A8Q8NDX2 589 aa21.83■■□□□ 1.08
PDLIM2-207ENST00000409417 HPSEQ9Y251 543 aa21.83■■□□□ 1.08
PDLIM2-207ENST00000409417 FAM237AA0A1B0GTK4 181 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 A0A1B0GVL5 298 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 EPOPA6NHQ4 379 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 MEIS3P2A8K0S8 358 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 GAP43P17677 238 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 STRN3Q13033 797 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 EPC2Q52LR7 807 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 AGMOQ6ZNB7 445 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 FAM178BQ8IXR5 827 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 TMEM192Q8IY95 271 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 HELQQ8TDG4 1101 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 STAMQ92783 540 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 FIZ1Q96SL8 496 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 TRIM9Q9C026 710 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 UBN1Q9NPG3 1134 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 SEL1LQ9UBV2 794 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 TNFSF13BQ9Y275 285 aa21.82■■□□□ 1.08
PDLIM2-207ENST00000409417 FRMD3A2A2Y4 597 aa21.81■■□□□ 1.08
PDLIM2-207ENST00000409417 NPTXRO95502 500 aa21.81■■□□□ 1.08
PDLIM2-207ENST00000409417 SLFN14P0C7P3 912 aa21.81■■□□□ 1.08
PDLIM2-207ENST00000409417 ABCD1P33897 745 aa21.81■■□□□ 1.08
PDLIM2-207ENST00000409417 BMPR1AP36894 532 aa21.81■■□□□ 1.08
PDLIM2-207ENST00000409417 CNNM4Q6P4Q7 775 aa21.81■■□□□ 1.08
PDLIM2-207ENST00000409417 HACE1Q8IYU2 909 aa21.81■■□□□ 1.08
PDLIM2-207ENST00000409417 LRRC43Q8N309 656 aa21.81■■□□□ 1.08
PDLIM2-207ENST00000409417 ACO2Q99798 780 aaKnown RBP21.81■■□□□ 1.08
PDLIM2-207ENST00000409417 ADPGKQ9BRR6 497 aa21.81■■□□□ 1.08
PDLIM2-207ENST00000409417 USP25Q9UHP3 1055 aa21.81■■□□□ 1.08
PDLIM2-207ENST00000409417 MYH11P35749 1972 aa21.81■■□□□ 1.08
PDLIM2-207ENST00000409417 K7ENM7 598 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 OFD1O75665 1012 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 ITGA4P13612 1032 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 IDEP14735 1019 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 EEF1DP3Q658K8 133 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 APBB1IPQ7Z5R6 666 aaPredicted RBP21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 SFR1Q86XK3 245 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 CEP57L1Q8IYX8 460 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 FBXO22Q8NEZ5 403 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 MRPS27Q92552 414 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 TARS2Q9BW92 718 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 MRPL9Q9BYD2 267 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 RNF39Q9H2S5 420 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 NXF3Q9H4D5 531 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 ST6GALNAC4Q9H4F1 302 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 RSAD1Q9HA92 442 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 PTPRHQ9HD43 1115 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 TYW1Q9NV66 732 aaKnown RBP21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 HES2Q9Y543 173 aa21.8■■□□□ 1.08
PDLIM2-207ENST00000409417 C5orf67F2Z3F1 127 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 ACTN4O43707 911 aaKnown RBP21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 RB1P06400 928 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 NDUFA8P51970 172 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 DCAF4L1Q3SXM0 396 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 HERC4Q5GLZ8 1057 aaPredicted RBP21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 LRRC55Q6ZSA7 311 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 FSIP1Q8NA03 581 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 MYLIPQ8WY64 445 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 GAS2L1Q99501 681 aaPredicted RBP21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 C7orf25Q9BPX7 421 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 PLVAPQ9BX97 442 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 TSHZ2Q9NRE2 1034 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 OLFML3Q9NRN5 406 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 PANK4Q9NVE7 773 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 TBX20Q9UMR3 447 aa21.79■■□□□ 1.08
PDLIM2-207ENST00000409417 FNDC1Q4ZHG4 1894 aaPredicted RBP21.78■■□□□ 1.08
PDLIM2-207ENST00000409417 NMT1P30419 496 aaKnown RBP21.78■■□□□ 1.08
PDLIM2-207ENST00000409417 CTNNB1P35222 781 aa21.78■■□□□ 1.08
PDLIM2-207ENST00000409417 SYKP43405 635 aa21.78■■□□□ 1.08
PDLIM2-207ENST00000409417 GTF2BQ00403 316 aa21.78■■□□□ 1.08
PDLIM2-207ENST00000409417 NOMO2Q5JPE7 1267 aa21.78■■□□□ 1.08
PDLIM2-207ENST00000409417 ZPBP2Q6X784 338 aa21.78■■□□□ 1.08
PDLIM2-207ENST00000409417 ZNF720Q7Z2F6 126 aa21.78■■□□□ 1.08
PDLIM2-207ENST00000409417 CCDC65Q8IXS2 484 aa21.78■■□□□ 1.08
PDLIM2-207ENST00000409417 SERTAD1Q9UHV2 236 aa21.78■■□□□ 1.08
PDLIM2-207ENST00000409417 GIT1Q9Y2X7 761 aa21.78■■□□□ 1.08
PDLIM2-207ENST00000409417 GOLGA6L4A6NEF3 574 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 RFXAPO00287 272 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 INPPL1O15357 1258 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 LPXNO60711 386 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 TOM1L1O75674 476 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 PROZP22891 400 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 ASIC1P78348 528 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 ADGRE1Q14246 886 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 C11orf84Q9BUA3 381 aaPredicted RBP21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 CWH43Q9H720 699 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 MRPL44Q9H9J2 332 aaKnown RBP21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 AAASQ9NRG9 546 aa21.77■■□□□ 1.08
PDLIM2-207ENST00000409417 KANSL3Q9P2N6 904 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms