RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 MTRQ99707 1265 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 FOXP1Q9H334 677 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 EPHX3Q9H6B9 360 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 SH2B1Q9NRF2 756 aaPredicted RBP10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 AGPAT5Q9NUQ2 364 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 FAM105AQ9NUU6 356 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 CLEC1BQ9P126 229 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 RAPGEFL1Q9UHV5 662 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 PCDHB12Q9Y5F1 795 aa10.73□□□□□ -0.69
NIF3L1-202ENST00000409020 HIDE1A8MVS5 230 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 DKC1O60832 514 aaKnown RBP eCLIP10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 LYPLA2O95372 231 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 LIG1P18858 919 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 ADAM15Q13444 863 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 CAPSQ13938 189 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 SKOR2Q2VWA4 1001 aaPredicted RBP10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 TTC38Q5R3I4 469 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 PLPP4Q5VZY2 271 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 KCNT2Q6UVM3 1135 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 RINLQ6ZS11 566 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 OTUD6AQ7L8S5 288 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 ABI1Q8IZP0 508 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 BCL7CQ8WUZ0 217 aaPredicted RBP10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 JPH2Q9BR39 696 aaPredicted RBP10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 POLD4Q9HCU8 107 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 TLR9Q9NR96 1032 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 CHST12Q9NRB3 414 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 BARX2Q9UMQ3 279 aaPredicted RBP10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 INPP5FQ9Y2H2 1132 aa10.72□□□□□ -0.69
NIF3L1-202ENST00000409020 FSCN2O14926 492 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 TSPAN1O60635 241 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 USO1O60763 962 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 OR52Z1P0C646 297 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 NEFHP12036 1026 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 LAG3P18627 525 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 GLRA2P23416 452 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 ARL2P36404 184 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 CDC42EP1Q00587 391 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 RABEP1Q15276 862 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 AMHR2Q16671 573 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 AGMOQ6ZNB7 445 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 CDR2LQ86X02 465 aaPredicted RBP10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 FAM178BQ8IXR5 827 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 MICAL1Q8TDZ2 1067 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 CPB2Q96IY4 423 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 TMX3Q96JJ7 454 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 TRAIPQ9BWF2 469 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 EIF2AQ9BY44 585 aaKnown RBP10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 RASSF4Q9H2L5 321 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 DACT1Q9NYF0 836 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 DNAJB4Q9UDY4 337 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 PCDHB6Q9Y5E3 794 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 PCDHB2Q9Y5E7 798 aa10.71□□□□□ -0.69
NIF3L1-202ENST00000409020 B4GALT5O43286 388 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 HOXA2O43364 376 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 ZC3H11AO75152 810 aaKnown RBP eCLIP10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 EOMESO95936 686 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 BCAR1P56945 870 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 MBTD1Q05BQ5 628 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 GNL2Q13823 731 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 IL17AQ16552 155 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 C11orf91Q3C1V1 193 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 ZNF280BQ86YH2 543 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 SLC39A11Q8N1S5 342 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 SMG8Q8ND04 991 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 MRPS27Q92552 414 aaKnown RBP10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 MSLNLQ96KJ4 702 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 ZNF558Q96NG5 402 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 TCF25Q9BQ70 676 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 VN1R3Q9BXE9 311 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 GBP3Q9H0R5 595 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 POLR3FQ9H1D9 316 aaPredicted RBP10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 AAASQ9NRG9 546 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 ANKEF1Q9NU02 776 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 TBC1D13Q9NVG8 400 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 RSPH14Q9UHP6 348 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 USP20Q9Y2K6 914 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 HES2Q9Y543 173 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 PPME1Q9Y570 386 aa10.7□□□□□ -0.7
NIF3L1-202ENST00000409020 CCDC189A1A4V9 331 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 TTLL13PA6NNM8 815 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 PP2D1A8MPX8 630 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 MBTPS2O43462 519 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 U2AF2P26368 475 aaKnown RBP eCLIP10.69□□□□□ -0.71e-6■□□□□ 9.2
NIF3L1-202ENST00000409020 NDUFV1P49821 464 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 PTENP60484 403 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 PLCB3Q01970 1234 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 ZP2Q05996 745 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 LLGL2Q6P1M3 1020 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 CCDC91Q7Z6B0 441 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 SRGAP1Q7Z6B7 1085 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 GJD3Q8N144 294 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 EFHBQ8N7U6 833 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 FEZF2Q8TBJ5 459 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 TCP11Q8WWU5 503 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 AUTS2Q8WXX7 1259 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 BSNDQ8WZ55 320 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 TBC1D32Q96NH3 1257 aa10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 INO80BQ9C086 356 aaPredicted RBP10.69□□□□□ -0.7
NIF3L1-202ENST00000409020 NRDE2Q9H7Z3 1164 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms