RNA–Protein interactions for RNA: ENST00000407343.3

PTPN12-202, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-202ENST00000407343 GAGE13Q4V321 117 aa8.22□□□□□ -1.09
PTPN12-202ENST00000407343 WDR75Q8IWA0 830 aaKnown RBP8.22□□□□□ -1.09
PTPN12-202ENST00000407343 GCDHQ92947 438 aaPredicted RBP8.22□□□□□ -1.09
PTPN12-202ENST00000407343 RUNDC1Q96C34 613 aa8.22□□□□□ -1.09
PTPN12-202ENST00000407343 KRTAP4-8Q9BYQ9 185 aa8.22□□□□□ -1.09
PTPN12-202ENST00000407343 XYLT2Q9H1B5 865 aa8.22□□□□□ -1.09
PTPN12-202ENST00000407343 AGO3Q9H9G7 860 aaKnown RBP8.22□□□□□ -1.09
PTPN12-202ENST00000407343 PMS2P1A4D2B8 440 aa8.21□□□□□ -1.1
PTPN12-202ENST00000407343 ADCY6O43306 1168 aa8.21□□□□□ -1.1
PTPN12-202ENST00000407343 AKR1B10O60218 316 aa8.21□□□□□ -1.1
PTPN12-202ENST00000407343 ADSLP30566 484 aaPredicted RBP8.21□□□□□ -1.1
PTPN12-202ENST00000407343 EPHB4P54760 987 aa8.21□□□□□ -1.1
PTPN12-202ENST00000407343 DSC2Q02487 901 aa8.21□□□□□ -1.1
PTPN12-202ENST00000407343 IL10RAQ13651 578 aa8.21□□□□□ -1.1
PTPN12-202ENST00000407343 NOMO1Q15155 1222 aa8.21□□□□□ -1.1
PTPN12-202ENST00000407343 USP45Q70EL2 814 aa8.21□□□□□ -1.1
PTPN12-202ENST00000407343 ANKRD53Q8N9V6 530 aa8.21□□□□□ -1.1
PTPN12-202ENST00000407343 FEZF2Q8TBJ5 459 aa8.21□□□□□ -1.1
PTPN12-202ENST00000407343 TAAR9Q96RI9 348 aa8.21□□□□□ -1.1
PTPN12-202ENST00000407343 NR2E1Q9Y466 385 aa8.21□□□□□ -1.1
PTPN12-202ENST00000407343 JUNP05412 331 aaKnown RBP8.2□□□□□ -1.1
PTPN12-202ENST00000407343 SREBF1P36956 1147 aa8.2□□□□□ -1.1
PTPN12-202ENST00000407343 FAM124AQ86V42 546 aa8.2□□□□□ -1.1
PTPN12-202ENST00000407343 GPR135Q8IZ08 494 aa8.2□□□□□ -1.1
PTPN12-202ENST00000407343 LGI4Q8N135 537 aa8.2□□□□□ -1.1
PTPN12-202ENST00000407343 ZSCAN18Q8TBC5 510 aaPredicted RBP8.2□□□□□ -1.1
PTPN12-202ENST00000407343 SLC35G2Q8TBE7 412 aa8.2□□□□□ -1.1
PTPN12-202ENST00000407343 ZNF480Q8WV37 535 aa8.2□□□□□ -1.1
PTPN12-202ENST00000407343 RABGGTAQ92696 567 aa8.2□□□□□ -1.1
PTPN12-202ENST00000407343 CLIP3Q96DZ5 547 aa8.2□□□□□ -1.1
PTPN12-202ENST00000407343 NEIL1Q96FI4 390 aaPredicted RBP8.2□□□□□ -1.1
PTPN12-202ENST00000407343 DMRTA2Q96SC8 542 aa8.2□□□□□ -1.1
PTPN12-202ENST00000407343 PTPN18Q99952 460 aa8.2□□□□□ -1.1
PTPN12-202ENST00000407343 PCDHB1Q9Y5F3 818 aa8.2□□□□□ -1.1
PTPN12-202ENST00000407343 SLC26A4O43511 780 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 PHF2O75151 1096 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 IFIT1BQ5T764 474 aaKnown RBP8.19□□□□□ -1.1
PTPN12-202ENST00000407343 BORAQ6PGQ7 559 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 KRTAP19-1Q8IUB9 90 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 SIAH1Q8IUQ4 282 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 OR7D4Q8NG98 312 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 KAT5Q92993 513 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 RELTQ969Z4 430 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 RPL10LQ96L21 214 aaKnown RBP8.19□□□□□ -1.1
PTPN12-202ENST00000407343 LRGUKQ96M69 825 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 SEC61A2Q9H9S3 476 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 BCO1Q9HAY6 547 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 NMRK2Q9NPI5 230 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 GPRC5DQ9NZD1 345 aa8.19□□□□□ -1.1
PTPN12-202ENST00000407343 OTOL1A6NHN0 477 aaPredicted RBP8.18□□□□□ -1.1
PTPN12-202ENST00000407343 FAM171A2A8MVW0 826 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 ITGA10O75578 1167 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 AMY1AP04745 511 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 ECHS1P30084 290 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 GUCY1A2P33402 732 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 PPP2CBP62714 309 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 PPP2CAP67775 309 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 TARDBPQ13148 414 aaKnown RBP eCLIP8.18□□□□□ -1.1
PTPN12-202ENST00000407343 TRMT2AQ8IZ69 625 aaKnown RBP8.18□□□□□ -1.1
PTPN12-202ENST00000407343 DIS3LQ8TF46 1054 aaKnown RBP8.18□□□□□ -1.1
PTPN12-202ENST00000407343 HDAC10Q969S8 669 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 MVB12AQ96EY5 273 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 DPYSL5Q9BPU6 564 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 PDCD2LQ9BRP1 358 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 SAP30BPQ9UHR5 308 aaKnown RBP8.18□□□□□ -1.1
PTPN12-202ENST00000407343 OAZ3Q9UMX2 235 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 PCDHA13Q9Y5I0 950 aa8.18□□□□□ -1.1
PTPN12-202ENST00000407343 AP1G1O43747 822 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 OFD1O75665 1012 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 BMP7P18075 431 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 ATF3P18847 181 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 CRHR1P34998 444 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 RAC3P60763 192 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 ATP8B2P98198 1209 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 RIN1Q13671 783 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 GALEQ14376 348 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 HSP90AB2PQ58FF8 381 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 CYB5RLQ6IPT4 315 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 CMTM4Q8IZR5 234 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 ZGPATQ8N5A5 531 aaKnown RBP8.17□□□□□ -1.1
PTPN12-202ENST00000407343 REPS2Q8NFH8 660 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 NSUN6Q8TEA1 469 aaKnown RBP8.17□□□□□ -1.1
PTPN12-202ENST00000407343 ATRNL1Q5VV63 1379 aa8.17□□□□□ -1.1
PTPN12-202ENST00000407343 VSTM5A8MXK1 200 aa8.16□□□□□ -1.1
PTPN12-202ENST00000407343 ENDOD1O94919 500 aa8.16□□□□□ -1.1
PTPN12-202ENST00000407343 GASTP01350 101 aa8.16□□□□□ -1.1
PTPN12-202ENST00000407343 U2AF1L5P0DN76 240 aaPredicted RBP8.16□□□□□ -1.1
PTPN12-202ENST00000407343 HSPA6P17066 643 aa8.16□□□□□ -1.1
PTPN12-202ENST00000407343 CASRP41180 1078 aa8.16□□□□□ -1.1
PTPN12-202ENST00000407343 JAG1P78504 1218 aa8.16□□□□□ -1.1
PTPN12-202ENST00000407343 U2AF1Q01081 240 aaKnown RBP eCLIP8.16□□□□□ -1.1
PTPN12-202ENST00000407343 MINDY4Q4G0A6 757 aa8.16□□□□□ -1.1
PTPN12-202ENST00000407343 PRAMEF14Q5SWL7 426 aa8.16□□□□□ -1.1
PTPN12-202ENST00000407343 GJC2Q5T442 439 aaPredicted RBP8.16□□□□□ -1.1
PTPN12-202ENST00000407343 CCDC181Q5TID7 509 aa8.16□□□□□ -1.1
PTPN12-202ENST00000407343 PLEKHH3Q7Z736 793 aa8.16□□□□□ -1.1
PTPN12-202ENST00000407343 RAB24Q969Q5 203 aa8.16□□□□□ -1.1
PTPN12-202ENST00000407343 MRGPRX4Q96LA9 322 aa8.16□□□□□ -1.1
PTPN12-202ENST00000407343 SSBP3Q9BWW4 388 aaPredicted RBP8.16□□□□□ -1.1
PTPN12-202ENST00000407343 IL23AQ9NPF7 189 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms