RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 CNOT10Q9H9A5 744 aaKnown RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 L2HGDHQ9H9P8 463 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 POLD4Q9HCU8 107 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ASNSD1Q9NWL6 643 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 DDX56Q9NY93 547 aaKnown RBP5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 ERAP1Q9NZ08 941 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 TBX20Q9UMR3 447 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 MYPNQ86TC9 1320 aa5.08□□□□□ -1.6
PCDH11X-207ENST00000406881 KLRG2A4D1S0 409 aaPredicted RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 SEC31AO94979 1220 aaKnown RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 MYL3P08590 195 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 KRT7P08729 469 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 HOXD10P28358 340 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 NAMPTP43490 491 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 DHX34Q14147 1143 aaKnown RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 SGSM1Q2NKQ1 1148 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 ZNF720Q7Z2F6 126 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 TRIM59Q8IWR1 403 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 REXO1L1PQ8IX06 675 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 ZFPM1Q8IX07 1006 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 RHOT1Q8IXI2 618 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 SPIRE2Q8WWL2 714 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 CABS1Q96KC9 395 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 ZNF560Q96MR9 790 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 NUP85Q9BW27 656 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 KCNMB3Q9NPA1 279 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 CYP26B1Q9NR63 512 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 KCND1Q9NSA2 647 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 BLOC1S4Q9NUP1 217 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 USP54Q70EL1 1684 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 LRRD1A4D1F6 860 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 HMGB1P1B2RPK0 211 aaPredicted RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 EVI5O60447 810 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 ATP1A1P05023 1023 aaKnown RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 PRLRP16471 622 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 SLC9A1P19634 815 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 PSMA2P25787 234 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 STX2P32856 288 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 CA8P35219 290 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 GTF2A2P52657 109 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 PLTPP55058 493 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 DHX9Q08211 1270 aaKnown RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 TBX2Q13207 712 aaPredicted RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 ZC2HC1CQ53FD0 456 aaPredicted RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 ZNF484Q5JVG2 852 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 KAZNQ674X7 775 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 OTOP1Q7RTM1 612 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 ABI1Q8IZP0 508 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 SPATA4Q8NEY3 305 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 OR6J1Q8NGC5 347 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 FBF1Q8TES7 1133 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 SCFD1Q8WVM8 642 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 ZKSCAN4Q969J2 545 aaPredicted RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 CFAP57Q96MR6 1250 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 NACA2Q9H009 215 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 SLC38A10Q9HBR0 1119 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 PCDHB2Q9Y5E7 798 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 FHOD1Q9Y613 1164 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 DUOX1Q9NRD9 1551 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 I3L4J1 428 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 SGK1O00141 431 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 VWA5AO00534 786 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 CLGNO14967 610 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 AP5Z1O43299 807 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 CTIFO43310 598 aaKnown RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 VPS41P49754 854 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 GALCP54803 685 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 RBP5P82980 135 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 PLA2G4FQ68DD2 849 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 SCARA5Q6ZMJ2 495 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 SYDE1Q6ZW31 735 aaPredicted RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 CCDC13Q8IYE1 715 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 SIX6OS1Q8N1H7 587 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 AFAP1L2Q8N4X5 818 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 KCTD6Q8NC69 237 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 MTMR14Q8NCE2 650 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 OR6B3Q8NGW1 331 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 CDKL2Q92772 493 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 FAM149B1Q96BN6 582 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 C11orf70Q9BRQ4 267 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 PARVAQ9NVD7 372 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 DONSONQ9NYP3 566 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 ABT1Q9ULW3 272 aaKnown RBP5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 FRMPD4Q14CM0 1322 aa5.07□□□□□ -1.6
PCDH11X-207ENST00000406881 A0A087X0B3 334 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 CCL15-CCL14A0A0B4J2E2 113 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 NFIBO00712 420 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 HUS1O60921 280 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 ATP2C2O75185 946 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 HOXC6P09630 235 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 ADCY2Q08462 1091 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 MKRN3Q13064 507 aaKnown RBP5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 NNTQ13423 1086 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 PRPSAP1Q14558 356 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 PGM5Q15124 567 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 CCL15Q16663 113 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 C6orf118Q5T5N4 469 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 NFRKBQ6P4R8 1299 aa5.06□□□□□ -1.6
PCDH11X-207ENST00000406881 DSTYKQ6XUX3 929 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms