RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 BRIP1Q9BX63 1249 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 DUOXA2Q1HG44 320 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 CATSPER1Q8NEC5 780 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 PPHLN1Q8NEY8 458 aaKnown RBP12.76□□□□□ -0.37
SMCR8-201ENST00000406438 SPATA33Q96N06 139 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 TGS1Q96RS0 853 aaKnown RBP12.76□□□□□ -0.37
SMCR8-201ENST00000406438 PRKCQQ04759 706 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 NBPF10Q6P3W6 841 aaKnown RBP12.76□□□□□ -0.37
SMCR8-201ENST00000406438 SYNDIG1Q9H7V2 258 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 MFAP3LO75121 409 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 KRT76Q01546 638 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 KCNH2Q12809 1159 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 SNRNP48Q6IEG0 339 aaKnown RBP12.76□□□□□ -0.37
SMCR8-201ENST00000406438 BTN2A2Q8WVV5 523 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 OPTNQ96CV9 577 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 HEMGNQ9BXL5 484 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 OSBPL3Q9H4L5 887 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 TLR2O60603 784 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 GRIK1P39086 918 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 HSD17B4P51659 736 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 ORC2Q13416 577 aaPredicted RBP12.76□□□□□ -0.37
SMCR8-201ENST00000406438 ZNF235Q14590 738 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 SPDYAQ5MJ70 313 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 PADI6Q6TGC4 694 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 ZBTB1Q9Y2K1 713 aa12.76□□□□□ -0.37
SMCR8-201ENST00000406438 CYP2D7A0A087X1C5 515 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 CRKP46108 304 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 GCLMP48507 274 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 MRPL28Q13084 256 aaKnown RBP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 GTF2H3Q13889 308 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 DMC1Q14565 340 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 KNOP1Q1ED39 458 aaKnown RBP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 WRNIP1Q96S55 665 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 STOML1Q9UBI4 398 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 ZC3H4Q9UPT8 1303 aaKnown RBP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 MMS22LQ6ZRQ5 1243 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 NSUN6Q8TEA1 469 aaKnown RBP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 PPP2R3CQ969Q6 453 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 YIPF2Q9BWQ6 316 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 PIM2Q9P1W9 311 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 H0Y626 953 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 ZNF197O14709 1029 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 TRIM16O95361 564 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 DMTNQ08495 405 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 TRADDQ15628 312 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 CNGA3Q16281 694 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 LRRC8EQ6NSJ5 796 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 PPP1R18Q6NYC8 613 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 ZNF579Q8NAF0 562 aaKnown RBP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 RMDN1Q96DB5 314 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 PROSER3Q2NL68 480 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 FAM20AQ96MK3 541 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 PDHA1P08559 390 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 MAGOHP61326 146 aaKnown RBP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 FAM102AQ5T9C2 384 aaPredicted RBP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 DCTN4Q9UJW0 460 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 KCNH4Q9UQ05 1017 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 COPG1Q9Y678 874 aaKnown RBP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 GFPT1Q06210 699 aaPredicted RBP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 PDCLQ13371 301 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 ATP11CQ8NB49 1132 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 MAD2L2Q9UI95 211 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 F5H423 210 aaPredicted RBP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 APOA1P02647 267 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 DDX53Q86TM3 631 aaKnown RBP12.75□□□□□ -0.37
SMCR8-201ENST00000406438 PPM1NQ8N819 430 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 ZNF555Q8NEP9 628 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 ASAP3Q8TDY4 903 aa12.75□□□□□ -0.37
SMCR8-201ENST00000406438 UBXN8O00124 270 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 GFAPP14136 432 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 QARSP47897 775 aaKnown RBP12.74□□□□□ -0.37
SMCR8-201ENST00000406438 PMS2P54278 862 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 RBAKQ9NYW8 714 aaPredicted RBP12.74□□□□□ -0.37
SMCR8-201ENST00000406438 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.74□□□□□ -0.37
SMCR8-201ENST00000406438 CCDC22O60826 627 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 COPB2P35606 906 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 CLCN6P51797 869 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 CC2D1AQ6P1N0 951 aaPredicted RBP12.74□□□□□ -0.37
SMCR8-201ENST00000406438 PKN3Q6P5Z2 889 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 TTLL11Q8NHH1 800 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 KIF2CQ99661 725 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 PALMDQ9NP74 551 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 CDK12Q9NYV4 1490 aaPredicted RBP12.74□□□□□ -0.37
SMCR8-201ENST00000406438 HIF1AQ16665 826 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 CNPY4Q8N129 248 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 PGBD4Q96DM1 585 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 ZNF556Q9HAH1 456 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 DOLKQ9UPQ8 538 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 PLEKHG2Q9H7P9 1386 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 NEO1Q92859 1461 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 GRID2IPA4D2P6 1211 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 CHGBP05060 677 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 ABCE1P61221 599 aaKnown RBP12.74□□□□□ -0.37
SMCR8-201ENST00000406438 USP17L5A8MUK1 530 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 CHRNA3P32297 505 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 KCNV1Q6PIU1 500 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 LGALS16A8MUM7 142 aa12.74□□□□□ -0.37
SMCR8-201ENST00000406438 H0Y3Z8 333 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms