RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 TKFCQ3LXA3 575 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ODR4Q5SWX8 454 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 CEP85LQ5SZL2 805 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 KCTD16Q68DU8 428 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 SLC30A10Q6XR72 485 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 CYFIP1Q7L576 1253 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ARMC9Q7Z3E5 817 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 RELL1Q8IUW5 271 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 MICALL1Q8N3F8 863 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 RDM1Q8NG50 284 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 EPS8L1Q8TE68 723 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ATXN2LQ8WWM7 1075 aaKnown RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 TATDN2Q93075 761 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 CNKSR1Q969H4 720 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ZBTB9Q96C00 473 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 TRERF1Q96PN7 1200 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 RUFY1Q96T51 708 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 CELF4Q9BZC1 486 aaKnown RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 TMEM117Q9H0C3 514 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 PABPC3Q9H361 631 aaKnown RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 CNOT10Q9H9A5 744 aaKnown RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 KCNH7Q9NS40 1196 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ANKEF1Q9NU02 776 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 UTP11Q9Y3A2 253 aaKnown RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 ASTN2O75129 1339 aaPredicted RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 NFASCO94856 1347 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 EMSYQ7Z589 1322 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 MYH9P35579 1960 aaKnown RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 PODXLO00592 558 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 FSCN2O14926 492 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ADRB2P07550 413 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 TRIM49P0CI25 452 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 TRIM49CP0CI26 452 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 TNFAIP3P21580 790 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 DR1Q01658 176 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 TTC31Q49AM3 519 aaPredicted RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 SLC39A4Q6P5W5 647 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 HS2ST1Q7LGA3 356 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 PIGWQ7Z7B1 504 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 NOP9Q86U38 636 aaKnown RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 JAMLQ86YT9 394 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 MAP4K3Q8IVH8 894 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ZSWIM2Q8NEG5 633 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 SPIRE2Q8WWL2 714 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 CTNNBL1Q8WYA6 563 aaPredicted RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 CYFIP2Q96F07 1278 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 ZHX3Q9H4I2 956 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 HSPBP1Q9NZL4 362 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 DDX20Q9UHI6 824 aaKnown RBP4.17□□□□□ -1.74
RTN4-209ENST00000405240 CNTN6Q9UQ52 1028 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 STYXL1Q9Y6J8 313 aa4.17□□□□□ -1.74
RTN4-209ENST00000405240 H0YIN7 160 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 ZC3H11AO75152 810 aaKnown RBP eCLIP4.16□□□□□ -1.741e-32■■■■□ 22.5
RTN4-209ENST00000405240 LRRN2O75325 713 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 OAS1P00973 400 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 GHRP10912 638 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 UNGP13051 313 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 IVDP26440 423 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 ZNF76P36508 570 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 XRRA1Q6P2D8 792 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.16□□□□□ -1.743e-7■□□□□ 8.1
RTN4-209ENST00000405240 XXYLT1Q8NBI6 393 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 TMEM161BQ8NDZ6 487 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 OR2W6PQ8NHA6 318 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 IL31RAQ8NI17 732 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 RAPGEF5Q92565 580 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 DHX38Q92620 1227 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 P3H4Q92791 437 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 SEMA4DQ92854 862 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 TRIM51Q9BSJ1 452 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 TRIM34Q9BYJ4 488 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 SLC38A10Q9HBR0 1119 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 POLD4Q9HCU8 107 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 TBC1D22BQ9NU19 505 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 UVRAGQ9P2Y5 699 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 ADAMTS5Q9UNA0 930 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 DCDC2CA8MYV0 355 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 ASAP2O43150 1006 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 SGPL1O95470 568 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 CFBP00751 764 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 FTLP02792 175 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 KCNA3P22001 575 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 INPP5BP32019 993 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 RPL21P46778 160 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 ATP1A2P50993 1020 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 PMS2P54278 862 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 RNASE9P60153 205 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 CDR2Q01850 454 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 PRPF4BQ13523 1007 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 PGM5Q15124 567 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 QPCTQ16769 361 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 TCERG1LQ5VWI1 586 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 TTC19Q6DKK2 380 aaPredicted RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 MMS22LQ6ZRQ5 1243 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 RPUSD2Q8IZ73 545 aaKnown RBP4.16□□□□□ -1.74
RTN4-209ENST00000405240 REPS2Q8NFH8 660 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 KRT35Q92764 455 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 HOOK2Q96ED9 719 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 TEPSINQ96N21 525 aa4.16□□□□□ -1.74
RTN4-209ENST00000405240 CEP89Q96ST8 783 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms