RNA–Protein interactions for RNA: ENST00000405010.7

HDAC9-202, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 4,239 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-202ENST00000405010 ATP9AO75110 1047 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 VEGFAP15692 232 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-202ENST00000405010 SERPINB3P29508 390 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 STAT3P40763 770 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 GCLMP48507 274 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 ITGA8P53708 1063 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 POLGP54098 1239 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-202ENST00000405010 TMPRSS15P98073 1019 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 SNX30Q5VWJ9 437 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 TBC1D9BQ66K14 1250 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 C6orf89Q6UWU4 347 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 RGS9BPQ6ZS82 235 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 NLRP9Q7RTR0 991 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 NT5DC3Q86UY8 548 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 EGFL6Q8IUX8 553 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 MAB21L3Q8N8X9 362 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 RBBP8NLQ8NC74 664 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-202ENST00000405010 PIGBQ92521 554 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 IFT122Q9HBG6 1241 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 GINM1Q9NU53 330 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 CHORDC1Q9UHD1 332 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-202ENST00000405010 RTCBQ9Y3I0 505 aaKnown RBP7.88□□□□□ -1.15
HDAC9-202ENST00000405010 MYO5BQ9ULV0 1848 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 ZNF804BA4D1E1 1349 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 PNMA6FA0A0J9YX94 578 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 GOLGA8RI6L899 631 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 UFL1O94874 794 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 EPHB2P29323 1055 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 RPL21P46778 160 aaKnown RBP7.88□□□□□ -1.15
HDAC9-202ENST00000405010 NPEPPSP55786 919 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 MED21Q13503 144 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 BLMHQ13867 455 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 TBC1D10BQ4KMP7 808 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-202ENST00000405010 TTBK2Q6IQ55 1244 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 ZNF572Q7Z3I7 529 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-202ENST00000405010 SLC13A5Q86YT5 568 aaPredicted RBP7.88□□□□□ -1.15
HDAC9-202ENST00000405010 ATL2Q8NHH9 583 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 IWS1Q96ST2 819 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 ANO3Q9BYT9 981 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 SLC4A7Q9Y6M7 1214 aa7.88□□□□□ -1.15
HDAC9-202ENST00000405010 A0A0A6YYK5 440 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-202ENST00000405010 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-202ENST00000405010 A8MUI8 341 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 USP17L15C9J2P7 530 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 USP17L13C9JLJ4 530 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 USP17L11C9JVI0 530 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 USP17L18D6R9N7 530 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 USP17L22D6RA61 530 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 USP17L17D6RBQ6 530 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 USP17L19D6RCP7 530 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 USP17L20D6RJB6 530 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 GOLGA8SH3BPF8 625 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 GOLGA8MH3BSY2 632 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 UPP2O95045 317 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 UNC5CO95185 931 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 TNNI1P19237 187 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 PSMC4P43686 418 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 MMP13P45452 471 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 PEX5P50542 639 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 FXR2P51116 673 aaKnown RBP eCLIP7.87□□□□□ -1.15
HDAC9-202ENST00000405010 USP17L24Q0WX57 530 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 THOC5Q13769 683 aaKnown RBP7.87□□□□□ -1.15
HDAC9-202ENST00000405010 CTTNQ14247 550 aaKnown RBP7.87□□□□□ -1.15
HDAC9-202ENST00000405010 SPDYCQ5MJ68 293 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 IRGCQ6NXR0 463 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 USP17L6PQ6QN14 398 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 ZBED8Q8IZ13 594 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 PDIK1LQ8N165 341 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 DAGLBQ8NCG7 672 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 SH3RF3Q8TEJ3 882 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-202ENST00000405010 ATP2A3Q93084 1043 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 TRIM11Q96F44 468 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 NEUROG2Q9H2A3 272 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 RHBDL2Q9NX52 303 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 AFF2P51816 1311 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 MST1RQ04912 1400 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 FOSP01100 380 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-202ENST00000405010 KRT1P04264 644 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 NUDT17P0C025 328 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 HARSP12081 509 aaKnown RBP7.87□□□□□ -1.15
HDAC9-202ENST00000405010 KDSRQ06136 332 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 ZNF268Q14587 947 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-202ENST00000405010 RABGAP1LQ5R372 815 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 WASHC2DQ5SRD0 308 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 MIS18BP1Q6P0N0 1132 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 SLC26A7Q8TE54 656 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 ZNF483Q8TF39 744 aaPredicted RBP7.87□□□□□ -1.15
HDAC9-202ENST00000405010 CEP95Q96GE4 821 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 ZSWIM1Q9BR11 485 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 NUF2Q9BZD4 464 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 CYP39A1Q9NYL5 469 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 APEX2Q9UBZ4 518 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 TRAF3IP3Q9Y228 551 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 BCS1LQ9Y276 419 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 IQANK1A0A1B0GTG1 560 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 C5orf60A6NFR6 353 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 B2RBV5 119 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 E7ENQ6 273 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 FMO5P49326 533 aa7.87□□□□□ -1.15
HDAC9-202ENST00000405010 BASP1P80723 227 aaKnown RBP7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms