RNA–Protein interactions for RNA: ENST00000404284.6

TOM1-203, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 2,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-203ENST00000404284 FAM187AA6NFU0 413 aa16.91■□□□□ 0.3
TOM1-203ENST00000404284 P4HBP07237 508 aaKnown RBP16.91■□□□□ 0.3
TOM1-203ENST00000404284 RARRES1P49788 294 aa16.91■□□□□ 0.3
TOM1-203ENST00000404284 PPP2R2AP63151 447 aa16.91■□□□□ 0.3
TOM1-203ENST00000404284 ALCAMQ13740 583 aa16.91■□□□□ 0.3
TOM1-203ENST00000404284 JAMLQ86YT9 394 aa16.91■□□□□ 0.3
TOM1-203ENST00000404284 RPUSD2Q8IZ73 545 aaKnown RBP16.91■□□□□ 0.3
TOM1-203ENST00000404284 KAT5Q92993 513 aa16.91■□□□□ 0.3
TOM1-203ENST00000404284 CTTNBP2NLQ9P2B4 639 aa16.91■□□□□ 0.3
TOM1-203ENST00000404284 ATP8A1Q9Y2Q0 1164 aa16.91■□□□□ 0.3
TOM1-203ENST00000404284 SYNGAP1Q96PV0 1343 aa16.91■□□□□ 0.3
TOM1-203ENST00000404284 PLSCR1O15162 318 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 PPIP5K2O43314 1243 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 DHX34Q14147 1143 aaKnown RBP16.9■□□□□ 0.3
TOM1-203ENST00000404284 NBPF20Q3BBV1 942 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 YTHDF3Q7Z739 585 aaKnown RBP16.9■□□□□ 0.3
TOM1-203ENST00000404284 AGBL1Q96MI9 1066 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 ACCSQ96QU6 501 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 PPANQ9NQ55 473 aaKnown RBP16.9■□□□□ 0.3
TOM1-203ENST00000404284 HSPBP1Q9NZL4 362 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 DBR1Q9UK59 544 aaKnown RBP16.9■□□□□ 0.3
TOM1-203ENST00000404284 FEM1BQ9UK73 627 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 ZNF536O15090 1300 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 MIF4GDA9UHW6 222 aaKnown RBP16.9■□□□□ 0.3
TOM1-203ENST00000404284 PAEPP09466 180 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 PLS3P13797 630 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 TMOD1P28289 359 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 PPARDQ03181 441 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 KRT71Q3SY84 523 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 ZNF746Q6NUN9 644 aaPredicted RBP16.9■□□□□ 0.3
TOM1-203ENST00000404284 ZDHHC24Q6UX98 284 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 CNKSR1Q969H4 720 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 VTI1AQ96AJ9 217 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 PCDHB18PQ96TA0 734 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 ZSWIM1Q9BR11 485 aa16.9■□□□□ 0.3
TOM1-203ENST00000404284 TACO1Q9BSH4 297 aaKnown RBP16.9■□□□□ 0.3
TOM1-203ENST00000404284 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.9■□□□□ 0.3
TOM1-203ENST00000404284 KIAA0391O15091 583 aaKnown RBP16.89■□□□□ 0.29
TOM1-203ENST00000404284 TRAPPC3O43617 180 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 PTGER2P43116 358 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 PTGIRP43119 386 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 MAGOHP61326 146 aaKnown RBP16.89■□□□□ 0.29
TOM1-203ENST00000404284 CETN1Q12798 172 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 SPP2Q13103 211 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 CLUL1Q15846 466 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 ZDHHC14Q8IZN3 488 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 XXYLT1Q8NBI6 393 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 EPS8L1Q8TE68 723 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 MAGOHBQ96A72 148 aaKnown RBP16.89■□□□□ 0.29
TOM1-203ENST00000404284 C18orf8Q96DM3 657 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 CYFIP2Q96F07 1278 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 GGA2Q9UJY4 613 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 NOCTQ9UK39 431 aaKnown RBP16.89■□□□□ 0.29
TOM1-203ENST00000404284 NFIBO00712 420 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 PHF2O75151 1096 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 KIAA0754O94854 1291 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 CHRNB2P17787 502 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 CALRP27797 417 aaKnown RBP16.89■□□□□ 0.29
TOM1-203ENST00000404284 CAP2P40123 477 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 GPC5P78333 572 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 MICALCLQ6ZW33 695 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 PRELID2Q8N945 189 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 TLCD1Q96CP7 247 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 TMEM117Q9H0C3 514 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 CHORDC1Q9UHD1 332 aaPredicted RBP16.89■□□□□ 0.29
TOM1-203ENST00000404284 CCPG1Q9ULG6 757 aa16.89■□□□□ 0.29
TOM1-203ENST00000404284 CHUKO15111 745 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 RTN2O75298 545 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 SGPL1O95470 568 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 ICAM1P05362 532 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 ADRB2P07550 413 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 FNTAP49354 379 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 DRG2P55039 364 aaKnown RBP16.88■□□□□ 0.29
TOM1-203ENST00000404284 EIF3BP55884 814 aaKnown RBP16.88■□□□□ 0.29
TOM1-203ENST00000404284 GTF2BQ00403 316 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 C6orf89Q6UWU4 347 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 NIPA1Q7RTP0 329 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 NOP9Q86U38 636 aaKnown RBP16.88■□□□□ 0.29
TOM1-203ENST00000404284 OTUD6BQ8N6M0 293 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 CLEC4DQ8WXI8 215 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 GRHL1Q9NZI5 618 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 USP20Q9Y2K6 914 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 GMNCA6NCL1 334 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 MAPK13O15264 365 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 MTA2O94776 668 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 FSBPO95073 299 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 NUDT17P0C025 328 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 MXI1P50539 228 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 PEX5P50542 639 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 SARNPP82979 210 aaKnown RBP16.88■□□□□ 0.29
TOM1-203ENST00000404284 TKFCQ3LXA3 575 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 SPDYE2Q495Y8 402 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 RSBN1LQ6PCB5 846 aaPredicted RBP16.88■□□□□ 0.29
TOM1-203ENST00000404284 HAUS6Q7Z4H7 955 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 FAM71AQ8IYT1 594 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 UBL4BQ8N7F7 174 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 C3orf20Q8ND61 904 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 FBXO25Q8TCJ0 367 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 KREMEN1Q96MU8 473 aa16.88■□□□□ 0.29
TOM1-203ENST00000404284 RPS6KC1Q96S38 1066 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms