RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 PDZD7Q9H5P4 517 aa36.47■■■■□ 3.43
CSNK1E-204ENST00000403904 TNFSF13BQ9Y275 285 aa36.47■■■■□ 3.43
CSNK1E-204ENST00000403904 MGEA5O60502 916 aa36.46■■■■□ 3.43
CSNK1E-204ENST00000403904 ACRP10323 421 aa36.46■■■■□ 3.43
CSNK1E-204ENST00000403904 FPGSQ05932 587 aa36.46■■■■□ 3.43
CSNK1E-204ENST00000403904 STX1AQ16623 288 aa36.46■■■■□ 3.43
CSNK1E-204ENST00000403904 EEF1DP3Q658K8 133 aa36.46■■■■□ 3.43
CSNK1E-204ENST00000403904 RPUSD2Q8IZ73 545 aaKnown RBP36.46■■■■□ 3.43
CSNK1E-204ENST00000403904 SEMA6BQ9H3T3 888 aa36.46■■■■□ 3.43
CSNK1E-204ENST00000403904 ZSCAN20P17040 1043 aaPredicted RBP36.45■■■■□ 3.43
CSNK1E-204ENST00000403904 APBB2Q92870 758 aa36.45■■■■□ 3.43
CSNK1E-204ENST00000403904 IL23AQ9NPF7 189 aa36.45■■■■□ 3.43
CSNK1E-204ENST00000403904 CHST12Q9NRB3 414 aa36.45■■■■□ 3.43
CSNK1E-204ENST00000403904 ANO10Q9NW15 660 aa36.45■■■■□ 3.43
CSNK1E-204ENST00000403904 ANKFY1Q9P2R3 1169 aa36.45■■■■□ 3.43
CSNK1E-204ENST00000403904 PSMA7O14818 248 aa36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 TOM1L1O75674 476 aa36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 PPP1R2P41236 205 aa36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 PPIGQ13427 754 aaKnown RBP eCLIP36.44■■■■□ 3.424e-7■■□□□ 13
CSNK1E-204ENST00000403904 DHTKD1Q96HY7 919 aaPredicted RBP36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 LBHD1Q9BQE6 289 aaPredicted RBP36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 TCHPQ9BT92 498 aa36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 FUCA2Q9BTY2 467 aa36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 PTPRHQ9HD43 1115 aa36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 CCDC192P0DO97 292 aa36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 DSC3Q14574 896 aa36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 TWF2Q6IBS0 349 aaKnown RBP36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 ADAM2Q99965 735 aa36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 TYW1Q9NV66 732 aaKnown RBP36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 CTNND2Q9UQB3 1225 aa36.44■■■■□ 3.42
CSNK1E-204ENST00000403904 N4BP3O15049 544 aa36.43■■■■□ 3.42
CSNK1E-204ENST00000403904 PROZP22891 400 aa36.43■■■■□ 3.42
CSNK1E-204ENST00000403904 MATR3P43243 847 aaKnown RBP eCLIP36.43■■■■□ 3.42
CSNK1E-204ENST00000403904 CNKSR3Q6P9H4 555 aa36.43■■■■□ 3.42
CSNK1E-204ENST00000403904 HS2ST1Q7LGA3 356 aa36.43■■■■□ 3.42
CSNK1E-204ENST00000403904 ZBTB33Q86T24 672 aa36.43■■■■□ 3.42
CSNK1E-204ENST00000403904 RTN4RL1Q86UN2 441 aaPredicted RBP36.43■■■■□ 3.42
CSNK1E-204ENST00000403904 FTHL17Q9BXU8 183 aa36.43■■■■□ 3.42
CSNK1E-204ENST00000403904 HAPLN2Q9GZV7 340 aa36.43■■■■□ 3.42
CSNK1E-204ENST00000403904 PDXKO00764 312 aa36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 ABLIM1O14639 778 aa36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 CLDN3O15551 220 aa36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 ADSSP30520 456 aa36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 PMS1P54277 932 aaKnown RBP36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 ZNF568Q3ZCX4 644 aa36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 CENPPQ6IPU0 288 aa36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 SLC27A1Q6PCB7 646 aa36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 MPZL3Q6UWV2 235 aa36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 C16orf59Q7L2K0 433 aa36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 NELFBQ8WX92 580 aa36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 EIF2AQ9BY44 585 aaKnown RBP36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 AGPAT3Q9NRZ7 376 aa36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 CEP290O15078 2479 aa36.42■■■■□ 3.42
CSNK1E-204ENST00000403904 CLIC2O15247 247 aa36.41■■■■□ 3.42
CSNK1E-204ENST00000403904 PFKMP08237 780 aa36.41■■■■□ 3.42
CSNK1E-204ENST00000403904 UBXN11Q5T124 520 aa36.41■■■■□ 3.42
CSNK1E-204ENST00000403904 LINC01599Q8WXQ3 324 aa36.41■■■■□ 3.42
CSNK1E-204ENST00000403904 P2RX5Q93086 422 aa36.41■■■■□ 3.42
CSNK1E-204ENST00000403904 DACH1Q9UI36 760 aa36.41■■■■□ 3.42
CSNK1E-204ENST00000403904 TRIM49BA6NDI0 452 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 HARSP12081 509 aaKnown RBP36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 CCNE1P24864 410 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 EPHB4P54760 987 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 STX17P56962 302 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 PAK1Q13153 545 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 C11orf57Q6ZUT1 292 aaPredicted RBP36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 POMGNT1Q8WZA1 660 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 CCDC51Q96ER9 411 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 ADPGKQ9BRR6 497 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 CBWD1Q9BRT8 395 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 DNAJC25Q9H1X3 360 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 STYXL1Q9Y6J8 313 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 NPTXRO95502 500 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 ZCWPW2Q504Y3 356 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 ANKRD40Q6AI12 368 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 CDT1Q9H211 546 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 TRAF3IP3Q9Y228 551 aa36.4■■■■□ 3.42
CSNK1E-204ENST00000403904 MCL1Q07820 350 aa36.39■■■■□ 3.42
CSNK1E-204ENST00000403904 IKBKEQ14164 716 aa36.39■■■■□ 3.42
CSNK1E-204ENST00000403904 SLFN12LQ6IEE8 588 aa36.39■■■■□ 3.42
CSNK1E-204ENST00000403904 ARMCX5Q6P1M9 558 aa36.39■■■■□ 3.42
CSNK1E-204ENST00000403904 TSPYL2Q9H2G4 693 aaPredicted RBP36.39■■■■□ 3.42
CSNK1E-204ENST00000403904 PCIF1Q9H4Z3 704 aa36.39■■■■□ 3.42
CSNK1E-204ENST00000403904 RGS18Q9NS28 235 aa36.39■■■■□ 3.42
CSNK1E-204ENST00000403904 MICAL3Q7RTP6 2002 aa36.39■■■■□ 3.42
CSNK1E-204ENST00000403904 A0A0B4J269 797 aa36.38■■■■□ 3.41
CSNK1E-204ENST00000403904 CALUO43852 315 aaPredicted RBP36.38■■■■□ 3.41
CSNK1E-204ENST00000403904 SNRPFP62306 86 aaKnown RBP36.38■■■■□ 3.41
CSNK1E-204ENST00000403904 NOLC1Q14978 699 aaKnown RBP eCLIP36.38■■■■□ 3.413e-6■■□□□ 12.8
CSNK1E-204ENST00000403904 ANO6Q4KMQ2 910 aa36.38■■■■□ 3.41
CSNK1E-204ENST00000403904 GOLGA5Q8TBA6 731 aa36.38■■■■□ 3.41
CSNK1E-204ENST00000403904 TRIM6Q9C030 488 aaPredicted RBP36.38■■■■□ 3.41
CSNK1E-204ENST00000403904 ENPP3O14638 875 aa36.37■■■■□ 3.41
CSNK1E-204ENST00000403904 MSTO1Q9BUK6 570 aa36.37■■■■□ 3.41
CSNK1E-204ENST00000403904 CGNQ9P2M7 1197 aaKnown RBP36.37■■■■□ 3.41
CSNK1E-204ENST00000403904 GARTP22102 1010 aa36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 ZNF365Q70YC5 407 aa36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 MED15Q96RN5 788 aa36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 TSG101Q99816 390 aa36.36■■■■□ 3.41
CSNK1E-204ENST00000403904 FAM105AQ9NUU6 356 aa36.36■■■■□ 3.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms