RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.89□□□□□ -0.351e-8■■■■□ 25.8
RBM39-206ENST00000403542 SYT11Q9BT88 431 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 PI4K2AQ9BTU6 479 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 NUP85Q9BW27 656 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 HEMGNQ9BXL5 484 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 ABCF3Q9NUQ8 709 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 NCANO14594 1321 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 GTPBP10A4D1E9 387 aaKnown RBP12.89□□□□□ -0.35
RBM39-206ENST00000403542 SLC16A4O15374 487 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 RARAP10276 462 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 BCRP11274 1271 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 VAMP7P51809 220 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 NPEPPSP55786 919 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 DGKZQ13574 1117 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 CEP55Q53EZ4 464 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 HP1BP3Q5SSJ5 553 aaPredicted RBP12.89□□□□□ -0.35
RBM39-206ENST00000403542 MOXD1Q6UVY6 613 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 CCDC197Q8NCU1 140 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 SEC14L1Q92503 715 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 ZNF653Q96CK0 615 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 TLCD1Q96CP7 247 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 ZSWIM1Q9BR11 485 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 WDR11Q9BZH6 1224 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 FAM129AQ9BZQ8 928 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 INTUQ9ULD6 942 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 TRPC6Q9Y210 931 aa12.89□□□□□ -0.35
RBM39-206ENST00000403542 PHF2O75151 1096 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 HOXA7P31268 230 aaPredicted RBP12.88□□□□□ -0.35
RBM39-206ENST00000403542 PTGIRP43119 386 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 GPC5P78333 572 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 SEL1L2Q5TEA6 688 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 LMBRD2Q68DH5 695 aaPredicted RBP12.88□□□□□ -0.35
RBM39-206ENST00000403542 CBWD2Q8IUF1 395 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 LMO3Q8TAP4 145 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 MRRFQ96E11 262 aaKnown RBP12.88□□□□□ -0.35
RBM39-206ENST00000403542 ZDHHC15Q96MV8 337 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 NACC1Q96RE7 527 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 NAP1L3Q99457 506 aaPredicted RBP12.88□□□□□ -0.35
RBM39-206ENST00000403542 ASIC3Q9UHC3 531 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 RASAL2Q9UJF2 1139 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 BHMG1C9JSJ3 638 aaPredicted RBP12.88□□□□□ -0.35
RBM39-206ENST00000403542 RASGRF2O14827 1237 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 GH1P01241 217 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 CIITAP33076 1130 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 PEX3P56589 373 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 SP4Q02446 784 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 SNCBQ16143 134 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 AOC3Q16853 763 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 KIF2BQ8N4N8 673 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 C1orf131Q8NDD1 294 aaKnown RBP12.88□□□□□ -0.35
RBM39-206ENST00000403542 IL31RAQ8NI17 732 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 ZNF564Q8TBZ8 553 aaPredicted RBP12.88□□□□□ -0.35
RBM39-206ENST00000403542 CCT6BQ92526 530 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 AGBL1Q96MI9 1066 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 MYCBPQ99417 103 aaPredicted RBP12.88□□□□□ -0.35
RBM39-206ENST00000403542 TXLNGYQ9BZA5 131 aa12.88□□□□□ -0.35
RBM39-206ENST00000403542 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.88□□□□□ -0.35
RBM39-206ENST00000403542 CCDC169A6NNP5 214 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 EIF3DO15371 548 aaKnown RBP eCLIP12.87□□□□□ -0.35
RBM39-206ENST00000403542 ECE2O60344 883 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 KRT5P13647 590 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 CHKAP35790 457 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 SWT1Q5T5J6 900 aaKnown RBP12.87□□□□□ -0.35
RBM39-206ENST00000403542 PLA2G4FQ68DD2 849 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 CAPN12Q6ZSI9 719 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 EIF1ADQ8N9N8 165 aaKnown RBP12.87□□□□□ -0.35
RBM39-206ENST00000403542 ATXN2LQ8WWM7 1075 aaKnown RBP12.87□□□□□ -0.35
RBM39-206ENST00000403542 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 PAGR1Q9BTK6 254 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 FGFR1OP2Q9NVK5 253 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 FRMPD4Q14CM0 1322 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 CHUKO15111 745 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 CCDC172P0C7W6 258 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 SSR1P43307 286 aaKnown RBP12.87□□□□□ -0.35
RBM39-206ENST00000403542 SEPT12Q8IYM1 358 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 ZNF317Q96PQ6 595 aaPredicted RBP12.87□□□□□ -0.35
RBM39-206ENST00000403542 PAIP2Q9BPZ3 127 aaKnown RBP12.87□□□□□ -0.35
RBM39-206ENST00000403542 DMAC2Q9NW81 257 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 HSPBP1Q9NZL4 362 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 SAMD15Q9P1V8 674 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 MTRF1LQ9UGC7 380 aaKnown RBP12.87□□□□□ -0.35
RBM39-206ENST00000403542 L3MBTL1Q9Y468 752 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 MYH11P35749 1972 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 O00370 1275 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 RIPK2O43353 540 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 CHRNB2P17787 502 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 ITGB5P18084 799 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 MXI1P50539 228 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 EIF3BP55884 814 aaKnown RBP12.87□□□□□ -0.35
RBM39-206ENST00000403542 KYNUQ16719 465 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 MEX3CQ5U5Q3 659 aaKnown RBP12.87□□□□□ -0.35
RBM39-206ENST00000403542 MIER3Q7Z3K6 550 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 EPS8L1Q8TE68 723 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 KREMEN1Q96MU8 473 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 TUFT1Q9NNX1 390 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 CHST7Q9NS84 486 aa12.87□□□□□ -0.35
RBM39-206ENST00000403542 CCT8L1PA6NM43 557 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 TCP11X1B4DZS4 312 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 ADRB2P07550 413 aa12.86□□□□□ -0.35
RBM39-206ENST00000403542 KIF22Q14807 665 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms