RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 OCMP0CE72 109 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-202ENST00000400053 SRGAP2CP0DJJ0 459 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 FCER1AP12319 257 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 BMP3P12645 472 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 ANXA13P27216 316 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 RECQLP46063 649 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-202ENST00000400053 RABGAP1LQ5R372 815 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 TTC23LQ6PF05 361 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 PPP4R3CPQ6ZMV5 832 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 GLYCTKQ8IVS8 523 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 CYFIP2Q96F07 1278 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 WARS2Q9UGM6 360 aaKnown RBP9.42□□□□□ -0.9
PTPRM-202ENST00000400053 PLEKHG2Q9H7P9 1386 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 KPNA7A9QM74 516 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 E2F6O75461 281 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 HSPA4LO95757 839 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 MCF2P10911 925 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 GPC5P78333 572 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 CCDC137Q6PK04 289 aaKnown RBP9.42□□□□□ -0.9
PTPRM-202ENST00000400053 SESTD1Q86VW0 696 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 SIX6OS1Q8N1H7 587 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 KIF2BQ8N4N8 673 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 PRMT1Q99873 361 aaKnown RBP9.42□□□□□ -0.9
PTPRM-202ENST00000400053 ING2Q9H160 280 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 CD209Q9NNX6 404 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 AGPAT5Q9NUQ2 364 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 BARHL2Q9NY43 387 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 PRKAG2Q9UGJ0 569 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 DIS3Q9Y2L1 958 aaKnown RBP9.42□□□□□ -0.9
PTPRM-202ENST00000400053 A0A1W2PQC6 194 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 TCP10L2B9ZVM9 353 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 ZBED1O96006 694 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 PSMA3P25788 255 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 GCLMP48507 274 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 ARL4CP56559 192 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 C1orf228Q6PIY5 440 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 SLC30A9Q6PML9 568 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 SPATA21Q7Z572 469 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 SFR1Q86XK3 245 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 SLC26A7Q8TE54 656 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 DEPDC1BQ8WUY9 529 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 SNX19Q92543 992 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 NAF1Q96HR8 494 aaKnown RBP9.42□□□□□ -0.9
PTPRM-202ENST00000400053 CD248Q9HCU0 757 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 CCDC195A0A1B0GUA6 201 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 ZFXP17010 805 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-202ENST00000400053 CARSP49589 748 aaKnown RBP9.42□□□□□ -0.9
PTPRM-202ENST00000400053 YWHAHQ04917 246 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-202ENST00000400053 DRP2Q13474 957 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 BYSLQ13895 437 aaKnown RBP9.42□□□□□ -0.9
PTPRM-202ENST00000400053 TBC1D9BQ66K14 1250 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 USP49Q70CQ1 688 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 TEX9Q8N6V9 391 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 SEC16BQ96JE7 1060 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 CEP170P1Q96L14 293 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 FUCA2Q9BTY2 467 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 FUT8Q9BYC5 575 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 SLITRK6Q9H5Y7 841 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 ADAM22Q9P0K1 906 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 SEPT9Q9UHD8 586 aaPredicted RBP9.42□□□□□ -0.9
PTPRM-202ENST00000400053 HPS5Q9UPZ3 1129 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 FHOD1Q9Y613 1164 aa9.42□□□□□ -0.9
PTPRM-202ENST00000400053 A0A0G2JLW4 131 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 PPP1R12AO14974 1030 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-202ENST00000400053 NR3C1P04150 777 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 CHN1P15882 459 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 ATICP31939 592 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 PCYT1AP49585 367 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 NCAPHQ15003 741 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 SF3B3Q15393 1217 aaKnown RBP9.41□□□□□ -0.9
PTPRM-202ENST00000400053 OR6B2Q6IFH4 312 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 SULF1Q8IWU6 871 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 SRBD1Q8N5C6 995 aaKnown RBP9.41□□□□□ -0.9
PTPRM-202ENST00000400053 C1orf54Q8WWF1 131 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 HPS3Q969F9 1004 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 GFM2Q969S9 779 aaKnown RBP9.41□□□□□ -0.9
PTPRM-202ENST00000400053 ZIM3Q96PE6 472 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 PHF20Q9BVI0 1012 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 RBM12Q9NTZ6 932 aaKnown RBP9.41□□□□□ -0.9
PTPRM-202ENST00000400053 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.41□□□□□ -0.9
PTPRM-202ENST00000400053 TFR2Q9UP52 801 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 L3MBTL1Q9Y468 752 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 ARHGAP10A1A4S6 786 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 SERPINI2O75830 405 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 KRT38O76015 456 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 CHRNA3P32297 505 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 ZNF394Q53GI3 561 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 C16orf87Q6PH81 154 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 RBM43Q6ZSC3 357 aaKnown RBP9.41□□□□□ -0.9
PTPRM-202ENST00000400053 FOXP4Q8IVH2 680 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-202ENST00000400053 PPM1NQ8N819 430 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 C7orf31Q8N865 590 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 TTC13Q8NBP0 860 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 SLC44A5Q8NCS7 719 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 NSUN4Q96CB9 384 aaKnown RBP9.41□□□□□ -0.9
PTPRM-202ENST00000400053 BTBD6Q96KE9 485 aa9.41□□□□□ -0.9
PTPRM-202ENST00000400053 FTLP02792 175 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-202ENST00000400053 HOXA13P31271 388 aaPredicted RBP9.41□□□□□ -0.9
PTPRM-202ENST00000400053 AP2B1P63010 937 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms