RNA–Protein interactions for RNA: ENST00000399976.6

USP16-204, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP16, Length 2,963 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-204ENST00000399976 P2RX5Q93086 422 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 FBXL18Q96ME1 805 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 ADPGKQ9BRR6 497 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 PDZD7Q9H5P4 517 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 LZTS1Q9Y250 596 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 INSL6Q9Y581 213 aa8.27□□□□□ -1.09
USP16-204ENST00000399976 TMEM189-UBE2V1I3L0A0 370 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 KINO60870 393 aaKnown RBP8.26□□□□□ -1.09
USP16-204ENST00000399976 GHRP10912 638 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 CYP3A5P20815 502 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 CD52P31358 61 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 EPHB4P54760 987 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 UBE3AQ05086 875 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 SURF1Q15526 300 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 FAM26FQ5R3K3 315 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 HERC6Q8IVU3 1022 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 SPATA18Q8TC71 538 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 SCLYQ96I15 445 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 UROC1Q96N76 676 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 RAD9AQ99638 391 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 CLSTN2Q9H4D0 955 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 FAM124BQ9H5Z6 455 aaPredicted RBP8.26□□□□□ -1.09
USP16-204ENST00000399976 CDHR5Q9HBB8 845 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 FAM105AQ9NUU6 356 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 ZMYND8Q9ULU4 1186 aaPredicted RBP8.26□□□□□ -1.09
USP16-204ENST00000399976 TRAF3IP3Q9Y228 551 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 PLXNA4Q9HCM2 1894 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 A0A1B0GVL5 298 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 LRRIQ4A6NIV6 560 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 PDXKO00764 312 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 FAM189A1O60320 539 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 RPN1P04843 607 aaKnown RBP8.26□□□□□ -1.09
USP16-204ENST00000399976 KRT18P05783 430 aaKnown RBP8.26□□□□□ -1.09
USP16-204ENST00000399976 ARF4P18085 180 aaPredicted RBP8.26□□□□□ -1.09
USP16-204ENST00000399976 CCL23P55773 120 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 PEX3P56589 373 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 SKOR2Q2VWA4 1001 aaPredicted RBP8.26□□□□□ -1.09
USP16-204ENST00000399976 EDRF1Q3B7T1 1238 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 ATF7IP2Q5U623 682 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 RTN4RL1Q86UN2 441 aaPredicted RBP8.26□□□□□ -1.09
USP16-204ENST00000399976 FAXDC2Q96IV6 333 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 NLRP4Q96MN2 994 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 MINDY3Q9H8M7 445 aa8.26□□□□□ -1.09
USP16-204ENST00000399976 A0A0B4J269 797 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 TNRC18O15417 2968 aaPredicted RBP8.25□□□□□ -1.09
USP16-204ENST00000399976 KCNE1P15382 129 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 ZNF658Q5TYW1 1059 aaPredicted RBP8.25□□□□□ -1.09
USP16-204ENST00000399976 PDE12Q6L8Q7 609 aaKnown RBP8.25□□□□□ -1.09
USP16-204ENST00000399976 ALKAL1Q6UXT8 129 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 SFR1Q86XK3 245 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 MYCT1Q8N699 235 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 RNPC3Q96LT9 517 aaKnown RBP8.25□□□□□ -1.09
USP16-204ENST00000399976 UIMC1Q96RL1 719 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 RNF19AQ9NV58 838 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 DENND3A2RUS2 1198 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 LETM1O95202 739 aaPredicted RBP8.25□□□□□ -1.09
USP16-204ENST00000399976 IL18RAPO95256 599 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 CTSHP09668 335 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 SPECC1Q5M775 1068 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 LRRC43Q8N309 656 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 MKNK1Q9BUB5 465 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 GPRC5CQ9NQ84 441 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 TYW1Q9NV66 732 aaKnown RBP8.25□□□□□ -1.09
USP16-204ENST00000399976 EXOC1Q9NV70 894 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 CNTN3Q9P232 1028 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 K7ENM7 598 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 PAPLNO95428 1278 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 EFEMP2O95967 443 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 FAM163BP0C2L3 166 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 ATF7P17544 494 aaPredicted RBP8.25□□□□□ -1.09
USP16-204ENST00000399976 ASIC1P78348 528 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 LRRC63Q05C16 580 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 GRIK3Q13003 919 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 NOLC1Q14978 699 aaKnown RBP eCLIP8.25□□□□□ -1.09
USP16-204ENST00000399976 SHHQ15465 462 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 TCTN1Q2MV58 587 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 FOXD4L5Q5VV16 416 aaPredicted RBP8.25□□□□□ -1.09
USP16-204ENST00000399976 FOXD4L4Q8WXT5 416 aaPredicted RBP8.25□□□□□ -1.09
USP16-204ENST00000399976 DHTKD1Q96HY7 919 aaPredicted RBP8.25□□□□□ -1.09
USP16-204ENST00000399976 ADAM2Q99965 735 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 ASB7Q9H672 318 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 DMAC2Q9NW81 257 aa8.25□□□□□ -1.09
USP16-204ENST00000399976 TRIP11Q15643 1979 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 OGTO15294 1046 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 MGEA5O60502 916 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 PRPF40AO75400 957 aaKnown RBP8.24□□□□□ -1.09
USP16-204ENST00000399976 CLTAP09496 248 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 SRGAP2CP0DJJ0 459 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 ATP2A2P16615 1042 aaKnown RBP8.24□□□□□ -1.09
USP16-204ENST00000399976 AP3M2P53677 418 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 ERVK-21P61565 698 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 CLDN10P78369 228 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 CUL4BQ13620 913 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 MORC3Q14149 939 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 SMG8Q8ND04 991 aaKnown RBP8.24□□□□□ -1.09
USP16-204ENST00000399976 SCLT1Q96NL6 688 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 OXCT2Q9BYC2 517 aaPredicted RBP8.24□□□□□ -1.09
USP16-204ENST00000399976 AAASQ9NRG9 546 aa8.24□□□□□ -1.09
USP16-204ENST00000399976 TOPORSQ9NS56 1045 aaPredicted RBP8.24□□□□□ -1.09
USP16-204ENST00000399976 SLC38A7Q9NVC3 462 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms