RNA–Protein interactions for RNA: ENST00000399973.1

USP16-202, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 3

Gene USP16, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-202ENST00000399973 SMG8Q8ND04 991 aaKnown RBP9.29□□□□□ -0.92
USP16-202ENST00000399973 CNNM3Q8NE01 707 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 MRPS27Q92552 414 aaKnown RBP9.29□□□□□ -0.92
USP16-202ENST00000399973 SNX21Q969T3 373 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 PABPC5Q96DU9 382 aaKnown RBP9.29□□□□□ -0.92
USP16-202ENST00000399973 AK8Q96MA6 479 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 DRC1Q96MC2 740 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 NECAB3Q96P71 396 aaPredicted RBP9.29□□□□□ -0.92
USP16-202ENST00000399973 FAM193BQ96PV7 902 aaPredicted RBP9.29□□□□□ -0.92
USP16-202ENST00000399973 RPS6KC1Q96S38 1066 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 UHRF1Q96T88 793 aaPredicted RBP9.29□□□□□ -0.92
USP16-202ENST00000399973 TCF25Q9BQ70 676 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 NFKBIZQ9BYH8 718 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 SPG21Q9NZD8 308 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 DNAJB4Q9UDY4 337 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 PUF60Q9UHX1 559 aaKnown RBP9.29□□□□□ -0.92
USP16-202ENST00000399973 MTMR6Q9Y217 621 aa9.29□□□□□ -0.92
USP16-202ENST00000399973 PLXNA3P51805 1871 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 TTLL13PA6NNM8 815 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 N4BP3O15049 544 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 B4GALT3O60512 393 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 ZNF623O75123 536 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 OFD1O75665 1012 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 EDN1P05305 212 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 PLA2G4BP0C869 781 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 HARSP12081 509 aaKnown RBP9.28□□□□□ -0.92
USP16-202ENST00000399973 PLCG1P19174 1290 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 NCLP19338 710 aaKnown RBP9.28□□□□□ -0.92
USP16-202ENST00000399973 AKAP5P24588 427 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 LONP1P36776 959 aaKnown RBP9.28□□□□□ -0.92
USP16-202ENST00000399973 SLC11A1P49279 550 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 SCNN1GP51170 649 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 AFF1P51825 1210 aaKnown RBP9.28□□□□□ -0.92
USP16-202ENST00000399973 ERVFC1P60507 584 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 KRT17Q04695 432 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 KARSQ15046 597 aaKnown RBP9.28□□□□□ -0.92
USP16-202ENST00000399973 FOXD4L6Q3SYB3 417 aaPredicted RBP9.28□□□□□ -0.92
USP16-202ENST00000399973 TMEM119Q4V9L6 283 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 SPECC1Q5M775 1068 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 RINT1Q6NUQ1 792 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 FOXD4L3Q6VB84 417 aaPredicted RBP9.28□□□□□ -0.92
USP16-202ENST00000399973 TMC7Q7Z402 723 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 MRPL10Q7Z7H8 261 aaKnown RBP9.28□□□□□ -0.92
USP16-202ENST00000399973 GPBP1Q86WP2 473 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 TMEM173Q86WV6 379 aaPredicted RBP9.28□□□□□ -0.92
USP16-202ENST00000399973 ZNF280BQ86YH2 543 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 SLC39A11Q8N1S5 342 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 RSPH1Q8WYR4 309 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 PRIMPOLQ96LW4 560 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 ZFP42Q96MM3 310 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 GAD1Q99259 594 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 ADPGKQ9BRR6 497 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 CCDC113Q9H0I3 377 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 PDZD7Q9H5P4 517 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 NRDE2Q9H7Z3 1164 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 TLE6Q9H808 572 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 KMT5AQ9NQR1 393 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 KLK14Q9P0G3 267 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 PARP2Q9UGN5 583 aa9.28□□□□□ -0.92
USP16-202ENST00000399973 PRG3Q9Y2Y8 225 aaPredicted RBP9.28□□□□□ -0.92
USP16-202ENST00000399973 NPHP3-ACAD11A0A0J9YXS1 232 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.27□□□□□ -0.93
USP16-202ENST00000399973 ARL5CA6NH57 179 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 SFI1A8K8P3 1242 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 PER2O15055 1255 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 SLC16A4O15374 487 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 TBX10O75333 385 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 DDHD2O94830 711 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 IL9P15248 144 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 TXLNAP40222 546 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 OR1G1P47890 313 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 NPTX2P47972 431 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 EFNA5P52803 228 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 PLCB3Q01970 1234 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 MAPK7Q13164 816 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 SMC1AQ14683 1233 aaKnown RBP9.27□□□□□ -0.93
USP16-202ENST00000399973 STK38Q15208 465 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 ZNF568Q3ZCX4 644 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 HYIQ5T013 277 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 EEF1DP3Q658K8 133 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 PTCRAQ6ISU1 281 aaPredicted RBP9.27□□□□□ -0.93
USP16-202ENST00000399973 LLGL2Q6P1M3 1020 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 DAW1Q8N136 415 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 TMEM87AQ8NBN3 555 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 SPDYE1Q8NFV5 336 aaPredicted RBP9.27□□□□□ -0.93
USP16-202ENST00000399973 BCL7CQ8WUZ0 217 aaPredicted RBP9.27□□□□□ -0.93
USP16-202ENST00000399973 AUTS2Q8WXX7 1259 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 USP28Q96RU2 1077 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 FZD8Q9H461 694 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 ZHX3Q9H4I2 956 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 ZSCAN16Q9H4T2 348 aaPredicted RBP9.27□□□□□ -0.93
USP16-202ENST00000399973 UBN1Q9NPG3 1134 aa9.27□□□□□ -0.93
USP16-202ENST00000399973 FBXO2Q9UK22 296 aaPredicted RBP9.27□□□□□ -0.93
USP16-202ENST00000399973 BARX2Q9UMQ3 279 aaPredicted RBP9.27□□□□□ -0.93
USP16-202ENST00000399973 A0A1B0GUA9 196 aa9.26□□□□□ -0.93
USP16-202ENST00000399973 HIDE1A8MVS5 230 aa9.26□□□□□ -0.93
USP16-202ENST00000399973 K7ERI5 159 aa9.26□□□□□ -0.93
USP16-202ENST00000399973 ACKR2O00590 384 aa9.26□□□□□ -0.93
USP16-202ENST00000399973 TBCAO75347 108 aaKnown RBP9.26□□□□□ -0.93
USP16-202ENST00000399973 RECQL4O94761 1208 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms