RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 A2ML1A8K2U0 1454 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 EXOC1LA0A1B0GW35 172 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 USP17L12C9JPN9 530 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 USP17L21D6R901 530 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PHKG2P15735 406 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 COPB2P35606 906 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PMS2P54278 862 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 YWHAGP61981 247 aaKnown RBP eCLIP10.17□□□□□ -0.78
SMAD9-203ENST00000399275 BFSP2Q13515 415 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 EFR3AQ14156 821 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 GPKOWQ92917 476 aaPredicted RBP eCLIP10.17□□□□□ -0.78
SMAD9-203ENST00000399275 GPCPD1Q9NPB8 672 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 GGT7Q9UJ14 662 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PCDHA12Q9UN75 941 aa10.17□□□□□ -0.78
SMAD9-203ENST00000399275 PDE8BO95263 885 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 RINT1Q6NUQ1 792 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 C1orf228Q6PIY5 440 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 KIF2BQ8N4N8 673 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 NOA1Q8NC60 698 aaKnown RBP10.16□□□□□ -0.78
SMAD9-203ENST00000399275 CDKL2Q92772 493 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 EME1Q96AY2 570 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 FAM96AQ9H5X1 160 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 ARHGEF35A5YM69 484 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 A6NJR5 290 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 LRRC53A6NM62 1247 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 SPDYE16A6NNV3 312 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-203ENST00000399275 hCG_1984214I3L0E3 225 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 NR1H3Q13133 447 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 STOX1Q6ZVD7 989 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 ZNF713Q8N859 430 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-203ENST00000399275 INPP5DQ92835 1189 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 NEO1Q92859 1461 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 CYFIP2Q96F07 1278 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 TRAPPC9Q96Q05 1148 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 CYP4F11Q9HBI6 524 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 RAB20Q9NX57 234 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 PTPN22Q9Y2R2 807 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 C15orf41Q9Y2V0 281 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 INO80Q9ULG1 1556 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-203ENST00000399275 ARAP3Q8WWN8 1544 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 UBN2Q6ZU65 1347 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 FAM187AA6NFU0 413 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 ERVV-2B6SEH9 535 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 TULP2O00295 520 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 FOXN1O15353 648 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 PPIP5K2O43314 1243 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 GSTT1P30711 240 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 ERFP50548 548 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 BYSLQ13895 437 aaKnown RBP10.16□□□□□ -0.78
SMAD9-203ENST00000399275 PREPLQ4J6C6 727 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-203ENST00000399275 TRAPPC11Q7Z392 1133 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 CADPS2Q86UW7 1296 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 UNC45BQ8IWX7 931 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 PUS3Q9BZE2 481 aaKnown RBP10.16□□□□□ -0.78
SMAD9-203ENST00000399275 IL25Q9H293 177 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 TELO2Q9Y4R8 837 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 P3H1Q32P28 736 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 HABP4Q5JVS0 413 aaKnown RBP10.16□□□□□ -0.78
SMAD9-203ENST00000399275 RNASE11Q8TAA1 199 aaKnown RBP10.16□□□□□ -0.78
SMAD9-203ENST00000399275 RIN2Q8WYP3 895 aaPredicted RBP10.16□□□□□ -0.78
SMAD9-203ENST00000399275 EEF2KMTQ96G04 330 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 FNBP1Q96RU3 617 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 ANKZF1Q9H8Y5 726 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 C12orf4Q9NQ89 552 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 DDX56Q9NY93 547 aaKnown RBP10.16□□□□□ -0.78
SMAD9-203ENST00000399275 ANAPC5Q9UJX4 755 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 SALL3Q9BXA9 1300 aa10.16□□□□□ -0.78
SMAD9-203ENST00000399275 C6orf229H3BNL8 230 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 STX7O15400 261 aaKnown RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 PLCG1P19174 1290 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 NR2F2P24468 414 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 ARMCX4Q5H9R4 360 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 TRIM67Q6ZTA4 783 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 SGMS1Q86VZ5 419 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 C19orf60Q96EN9 201 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 BTBD6Q96KE9 485 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 DMAP1Q9NPF5 467 aaPredicted RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 WDR70Q9NW82 654 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 NSMCE4AQ9NXX6 385 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 ZBTB39O15060 712 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 FXR1P51114 621 aaKnown RBP eCLIP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 PICALMQ13492 652 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 ALKBH5Q6P6C2 394 aaKnown RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 TRIM65Q6PJ69 517 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 CENPUQ71F23 418 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 STK32CQ86UX6 486 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 OSBPL10Q9BXB5 764 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 DHX36Q9H2U1 1008 aaKnown RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 SUGCTQ9HAC7 445 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 IARS2Q9NSE4 1012 aaKnown RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 USP15Q9Y4E8 981 aaPredicted RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 CPDO75976 1380 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 ABCA9Q8IUA7 1624 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 MAP2K7O14733 419 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 FGGP02679 453 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 TRIM71Q2Q1W2 868 aaKnown RBP10.15□□□□□ -0.78
SMAD9-203ENST00000399275 BSPRYQ5W0U4 402 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 STX19Q8N4C7 294 aa10.15□□□□□ -0.78
SMAD9-203ENST00000399275 ZWILCHQ9H900 591 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms