RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 RAB20Q9NX57 234 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 ZNF711Q9Y462 761 aa15.58■□□□□ 0.08
RPRD1A-202ENST00000399022 MT-ND3P03897 115 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 USP11P51784 963 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 YWHAGP61981 247 aaKnown RBP eCLIP15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 MKRN3Q13064 507 aaKnown RBP15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 ORC2Q13416 577 aaPredicted RBP15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 TMCO4Q5TGY1 634 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 ZNF746Q6NUN9 644 aaPredicted RBP15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 MORC4Q8TE76 937 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 CRAMP1Q96RY5 1269 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 GHRP10912 638 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 DEUP1Q05D60 604 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 DHX34Q14147 1143 aaKnown RBP15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 ITIH4Q14624 930 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 THEMIS2Q5TEJ8 643 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 C1orf146Q5VVC0 180 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 TTC17Q96AE7 1141 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 RTFDC1Q9BY42 306 aaPredicted RBP15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 RAVER2Q9HCJ3 691 aaKnown RBP15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 WNT7AO00755 349 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 MDM2Q00987 491 aaPredicted RBP15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 EEPD1Q7L9B9 569 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 AGAP11Q8TF27 550 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 ERP44Q9BS26 406 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 CACNA1FO60840 1977 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 TPD52P55327 224 aaPredicted RBP15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 ZNF844Q08AG5 666 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 HEMGNQ9BXL5 484 aa15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 ZNF277Q9NRM2 450 aaPredicted RBP15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.57■□□□□ 0.08
RPRD1A-202ENST00000399022 MTERF2Q49AM1 385 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 PADI6Q6TGC4 694 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 JAMLQ86YT9 394 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 PRCCQ92733 491 aaPredicted RBP15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 IFT122Q9HBG6 1241 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 NDE1Q9NXR1 346 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 ETAA1Q9NY74 926 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 RCCD1A6NED2 376 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 TARSP26639 723 aaKnown RBP15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 MFAP3P55082 362 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 RNF207Q6ZRF8 634 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 NKX2-3Q8TAU0 364 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 FERMT1Q9BQL6 677 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 KBTBD4Q9NVX7 518 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 THEGQ9P2T0 379 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 CYTH3O43739 400 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 ASNSP08243 561 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 NSFP46459 744 aaKnown RBP15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 GRB10Q13322 594 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 LRRC36Q1X8D7 754 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 KLHDC7AQ5VTJ3 777 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 TTI2Q6NXR4 508 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 CASC4Q6P4E1 433 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 TTLL6Q8N841 843 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 C1orf54Q8WWF1 131 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 RFFLQ8WZ73 363 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 PABPC3Q9H361 631 aaKnown RBP15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 SMYD3Q9H7B4 428 aa15.56■□□□□ 0.08
RPRD1A-202ENST00000399022 RNF225M0QZC1 329 aaPredicted RBP15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 SGK1O00141 431 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 IPO5O00410 1097 aaKnown RBP15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 PRELPP51888 382 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 GALCP54803 685 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 ERVK-9P63128 1117 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 DTNBP1Q96EV8 351 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 REEP2Q9BRK0 252 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 SLC9A1P19634 815 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 ALDH5A1P51649 535 aaPredicted RBP15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 PTK2Q05397 1052 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 EPS8L3Q8TE67 593 aaKnown RBP15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 PPP4R1Q8TF05 950 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 SH3GL2Q99962 352 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 PACSIN1Q9BY11 444 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 TMEM206Q9H813 350 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 ARFIP2P53365 341 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 DRAP1Q14919 205 aaPredicted RBP15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 DCAF15Q66K64 600 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 FAM160B2Q86V87 743 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 TRIM59Q8IWR1 403 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 HIC2Q96JB3 615 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 RHBDL2Q9NX52 303 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 BCAP29Q9UHQ4 241 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 LTN1O94822 1766 aa15.55■□□□□ 0.08
RPRD1A-202ENST00000399022 SLC16A4O15374 487 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 SHOX2O60902 331 aaPredicted RBP15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 ZWINTO95229 277 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 EPHB1P54762 984 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 ANKRD20A2Q5SQ80 823 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 ANKRD20A1Q5TYW2 823 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 ATP6V0A1Q93050 837 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 OLFM3Q96PB7 478 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 UBXN6Q9BZV1 441 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 DNAI2Q9GZS0 605 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 AGPSO00116 658 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 GYS1P13807 737 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 PIK3CAP42336 1068 aa15.54■□□□□ 0.08
RPRD1A-202ENST00000399022 KCNJ1P48048 391 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms