RNA–Protein interactions for RNA: ENST00000398559.6

TMF1-201, Transcript of TATA element modulatory factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMF1, Length 6,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-201ENST00000398559 PIK3R2O00459 728 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 CCDC85BQ15834 202 aaPredicted RBP12.5□□□□□ -0.41
TMF1-201ENST00000398559 FASTKD1Q53R41 847 aaKnown RBP12.5□□□□□ -0.41
TMF1-201ENST00000398559 MTBPQ96DY7 904 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 MMTAG2Q9BU76 263 aaKnown RBP12.5□□□□□ -0.41
TMF1-201ENST00000398559 TEX12Q9BXU0 123 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 ASPSCR1Q9BZE9 553 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 LIMA1Q9UHB6 759 aaKnown RBP12.5□□□□□ -0.41
TMF1-201ENST00000398559 ARL2BPQ9Y2Y0 163 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 KIF1BO60333 1816 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 H7C1W4 665 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 PYGLP06737 847 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 TYK2P29597 1187 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 RHPN2Q8IUC4 686 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 THEM5Q8N1Q8 247 aa12.5□□□□□ -0.41
TMF1-201ENST00000398559 SYNDIG1LA6NDD5 238 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 KDM1AO60341 852 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 MAGEB5Q9BZ81 275 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 ZDHHC9Q9Y397 364 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 PPP1R37O75864 691 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 NME3Q13232 169 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 GRAPQ13588 217 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 FOXP4Q8IVH2 680 aaPredicted RBP12.49□□□□□ -0.41
TMF1-201ENST00000398559 CDKL3Q8IVW4 592 aaPredicted RBP12.49□□□□□ -0.41
TMF1-201ENST00000398559 GRAPLQ8TC17 118 aaPredicted RBP12.49□□□□□ -0.41
TMF1-201ENST00000398559 TRABDQ9H4I3 376 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 PALMDQ9NP74 551 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 SNX12Q9UMY4 172 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 AURKCQ9UQB9 309 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 ZFXP17010 805 aaPredicted RBP12.49□□□□□ -0.41
TMF1-201ENST00000398559 WWP1Q9H0M0 922 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 EHD2Q9NZN4 543 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 KIF1CO43896 1103 aaKnown RBP12.49□□□□□ -0.41
TMF1-201ENST00000398559 SUPT3HO75486 399 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 IL10P22301 178 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 BAG6P46379 1132 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 EPHA10Q5JZY3 1008 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 ANKRD40Q6AI12 368 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 PPP4R4Q6NUP7 873 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 GCNAQ96QF7 691 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 DONSONQ9NYP3 566 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 ZNF229Q9UJW7 825 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 TRIM49P0CI25 452 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 TRIM49CP0CI26 452 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 BCAR1P56945 870 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 STAT4Q14765 748 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 GRM4Q14833 912 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 OR9Q1Q8NGQ5 310 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 LZICQ8WZA0 190 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 STAMBPL1Q96FJ0 436 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 FAM20AQ96MK3 541 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 NR1H4Q96RI1 486 aaPredicted RBP12.49□□□□□ -0.41
TMF1-201ENST00000398559 RMDN3Q96TC7 470 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 SH3GL3Q99963 347 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 NEUROG2Q9H2A3 272 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 NPHS2Q9NP85 383 aa12.49□□□□□ -0.41
TMF1-201ENST00000398559 TMCC1O94876 653 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 CNGA3Q16281 694 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 HIF1AQ16665 826 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 PARVAQ9NVD7 372 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 PFASO15067 1338 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 EMSYQ7Z589 1322 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 USP6P35125 1406 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 ATP6V1E1P36543 226 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 RAP1GDS1P52306 607 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 RC3H1Q5TC82 1133 aaKnown RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 CATSPER1Q8NEC5 780 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 AGPAT1Q99943 283 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 IRX2Q9BZI1 471 aaPredicted RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 BARHL2Q9NY43 387 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 HPCAL4Q9UM19 191 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 CDK12Q9NYV4 1490 aaPredicted RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 EIF3HO15372 352 aaKnown RBP eCLIP12.48□□□□□ -0.41
TMF1-201ENST00000398559 HUS1O60921 280 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 ELF1P32519 619 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 CACNB3P54284 484 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 PPP1R18Q6NYC8 613 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 CCT8L2Q96SF2 557 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 EGFL8Q99944 293 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 LBHD1Q9BQE6 289 aaPredicted RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 RAVER2Q9HCJ3 691 aaKnown RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 ARHGAP26Q9UNA1 814 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 CPSF1Q10570 1443 aaKnown RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 STXBP3O00186 592 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 MYL3P08590 195 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 PMS1P54277 932 aaKnown RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 MAPRE2Q15555 327 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 GUF1Q8N442 669 aaKnown RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 DHX35Q9H5Z1 703 aaKnown RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 EML4Q9HC35 981 aaKnown RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 KLHL11Q9NVR0 708 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 SFMBT1Q9UHJ3 866 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 AGTP01019 485 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 TBCCQ15814 346 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 LONRF1Q17RB8 773 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 FAM102AQ5T9C2 384 aaPredicted RBP12.48□□□□□ -0.41
TMF1-201ENST00000398559 TEX2Q8IWB9 1127 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 SCN4BQ8IWT1 228 aa12.48□□□□□ -0.41
TMF1-201ENST00000398559 CHP1Q99653 195 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms