RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 SYCP3Q8IZU3 236 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 ZNF713Q8N859 430 aaPredicted RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 ATL2Q8NHH9 583 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 ERMNQ8TAM6 284 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 CHMP6Q96FZ7 201 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 NEUROG2Q9H2A3 272 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 GANQ9H2C0 597 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 MMADHCQ9H3L0 296 aaPredicted RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 QTRT2Q9H974 415 aaKnown RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 LUC7LQ9NQ29 371 aaKnown RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 GDF3Q9NR23 364 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 TAS2R14Q9NYV8 317 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 TMOD4Q9NZQ9 345 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 PRR12Q9ULL5 1215 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 ABCB11O95342 1321 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 SPATA31A6Q5VVP1 1343 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 TESPA1A2RU30 521 aaPredicted RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 GOLGA8IPA6NC78 632 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 GOLGA8JA6NMD2 632 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 PHF20L1A8MW92 1017 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 TTI1O43156 1089 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 SART1O43290 800 aaKnown RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 DAPK3O43293 454 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 ATMINO43313 823 aaPredicted RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 FLOT1O75955 427 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 SLITRK3O94933 977 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 CALCAP01258 141 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 ARP10275 920 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 DRD4P21917 467 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 RPA1P27694 616 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 TMOD1P28289 359 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 HOXA10P31260 410 aaPredicted RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 PCK1P35558 622 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 NOVP48745 357 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 MCCD1P59942 119 aaPredicted RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 ERVK-9P63128 1117 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 RBM26Q5T8P6 1007 aaKnown RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 SYDE2Q5VT97 1194 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 RINT1Q6NUQ1 792 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 C15orf52Q6ZUT6 534 aaKnown RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 TRIM42Q8IWZ5 723 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 SLFN12Q8IYM2 578 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 METTL13Q8N6R0 699 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 SYT2Q8N9I0 419 aaPredicted RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 USP38Q8NB14 1042 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 SLC35C1Q96A29 364 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 CCDC97Q96F63 343 aaPredicted RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 CRAMP1Q96RY5 1269 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 TRIM51Q9BSJ1 452 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 WDR18Q9BV38 432 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 VCXQ9H320 206 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 CNOT10Q9H9A5 744 aaKnown RBP5.4□□□□□ -1.54
SSR1-202ENST00000397511 PLCB1Q9NQ66 1216 aa5.4□□□□□ -1.54
SSR1-202ENST00000397511 ARFGEF1Q9Y6D6 1849 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 PJA2O43164 708 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 TGFB1I1O43294 461 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 EXOC3O60645 756 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 FGGP02679 453 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 HMGB2P26583 209 aaKnown RBP5.4□□□□□ -1.55
SSR1-202ENST00000397511 USP11P51784 963 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 GALCP54803 685 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 SGSM1Q2NKQ1 1148 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 COBLL1Q53SF7 1204 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 AGBL2Q5U5Z8 902 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 APBB1IPQ7Z5R6 666 aaPredicted RBP5.4□□□□□ -1.55
SSR1-202ENST00000397511 ERICH1Q86X53 443 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 FAM178BQ8IXR5 827 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 FAM186BQ8IYM0 893 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 RNF10Q8N5U6 811 aaKnown RBP5.4□□□□□ -1.55
SSR1-202ENST00000397511 MAIP1Q8WWC4 291 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.4□□□□□ -1.55
SSR1-202ENST00000397511 GLG1Q92896 1179 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 CEP63Q96MT8 703 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 ZCWPW1Q9H0M4 648 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.4□□□□□ -1.55
SSR1-202ENST00000397511 SAMD15Q9P1V8 674 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 NOC2LQ9Y3T9 749 aaKnown RBP5.4□□□□□ -1.55
SSR1-202ENST00000397511 ASB3Q9Y575 518 aa5.4□□□□□ -1.55
SSR1-202ENST00000397511 IGSF9BQ9UPX0 1349 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 TLDC2A0PJX2 215 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 DCDC2CA8MYV0 355 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 RBAK-RBAKDNI3L0D1 243 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 DDX3XO00571 662 aaKnown RBP eCLIP5.39□□□□□ -1.555e-15■■□□□ 11.6
SSR1-202ENST00000397511 CALUO43852 315 aaPredicted RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 GAS7O60861 476 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 HIP1RO75146 1068 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 GNA14O95837 355 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 KRT13P13646 458 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 GBP1P32455 592 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 SSTR3P32745 418 aaPredicted RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 CTNNA1P35221 906 aaKnown RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 HSPA9P38646 679 aaKnown RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 CD151P48509 253 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 ALDH5A1P51649 535 aaPredicted RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 STAT2P52630 851 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 POLE2P56282 527 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 DRAP1Q14919 205 aaPredicted RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 C2CD6Q53TS8 623 aa5.39□□□□□ -1.55
SSR1-202ENST00000397511 FAM133BQ5BKY9 247 aaKnown RBP5.39□□□□□ -1.55
SSR1-202ENST00000397511 CPNE8Q86YQ8 564 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms