RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 RASAL2Q9UJF2 1139 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 SMCHD1A6NHR9 2005 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 CDR1P51861 262 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 MARSP56192 900 aaKnown RBP11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 GPC5P78333 572 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 PGM5Q15124 567 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 GADL1Q6ZQY3 521 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 KIFAP3Q92845 792 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 C18orf8Q96DM3 657 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 FMO2Q99518 471 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 TMEM117Q9H0C3 514 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 CNOT8Q9UFF9 292 aaKnown RBP11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 ANAPC7Q9UJX3 599 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 PCDHA10Q9Y5I2 948 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 ADRB2P07550 413 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 CCND2P30279 289 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 PIK3CAP42336 1068 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 SCARA5Q6ZMJ2 495 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 CPLX4Q7Z7G2 160 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 NT5DC3Q86UY8 548 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 CRYGNQ8WXF5 182 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 SCLT1Q96NL6 688 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 POLR3FQ9H1D9 316 aaPredicted RBP11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 MTUS1Q9ULD2 1270 aa11.24□□□□□ -0.61
CPSF1P1-201ENST00000397477 ANKRD62A6NC57 917 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 KRT19P08727 400 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 MAPK4P31152 587 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 HSD17B3P37058 310 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 IGBP1P78318 339 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 USP37Q86T82 979 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 OTUD6BQ8N6M0 293 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 ZNF564Q8TBZ8 553 aaPredicted RBP11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 WHAMMQ8TF30 809 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 C7orf43Q8WVR3 580 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 ATP6V0A1Q93050 837 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 PAIP2Q9BPZ3 127 aaKnown RBP11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 C11orf70Q9BRQ4 267 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 PCDHB4Q9Y5E5 795 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 RBAK-RBAKDNI3L0D1 243 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 PPFIA4O75335 1185 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 CCNE2O96020 404 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 MAGOHP61326 146 aaKnown RBP11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 CALCOCO2Q13137 446 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 CCDC38Q502W7 563 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 HP1BP3Q5SSJ5 553 aaPredicted RBP11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 KRT39Q6A163 491 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 NAP1L3Q99457 506 aaPredicted RBP11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 MLXIPLQ9NP71 852 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 TBX20Q9UMR3 447 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 ZMYM2Q9UBW7 1377 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 LAMB1P07942 1786 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 ZNF233A6NK53 670 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 HOXA7P31268 230 aaPredicted RBP11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 FKBP1AP62942 108 aaKnown RBP11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 PPP2R5AQ15172 486 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 HAUS1Q96CS2 278 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 IWS1Q96ST2 819 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 ADAM33Q9BZ11 813 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 RAB17Q9H0T7 212 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 NEUROG2Q9H2A3 272 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 KCNK9Q9NPC2 374 aa11.23□□□□□ -0.61
CPSF1P1-201ENST00000397477 MYH7BA7E2Y1 1941 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 CLDN3O15551 220 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 ACSL3O95573 720 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 CD19P15391 556 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 FGFR4P22455 802 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 GUCY2CP25092 1073 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 TMEM270Q6UE05 265 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 NOP9Q86U38 636 aaKnown RBP11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 ALG3Q92685 438 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 MKNK1Q9BUB5 465 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 GOLGA6L7A0A1B0GV03 622 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 K7ERI5 159 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 GJB6O95452 261 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 TMEM253P0C7T8 217 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 POTEJP0CG39 1038 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 ATF7P17544 494 aaPredicted RBP11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 KRT76Q01546 638 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 PRKCEQ02156 737 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 IFT88Q13099 833 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 MTM1Q13496 603 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 DCAF15Q66K64 600 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 DENND2CQ68D51 928 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 ARHGAP27Q6ZUM4 889 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 SRLQ86TD4 932 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 MDM1Q8TC05 714 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 ATG4AQ8WYN0 398 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 ZBTB45Q96K62 511 aaPredicted RBP11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 PXMP2Q9NR77 195 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 MTRF1LQ9UGC7 380 aaKnown RBP11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 NSFP46459 744 aaKnown RBP11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 CNTN2Q02246 1040 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 MAPK7Q13164 816 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 BMT2Q1RMZ1 405 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 GNPTABQ3T906 1256 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 FBXL13Q8NEE6 735 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 NSUN6Q8TEA1 469 aaKnown RBP11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 SEMA4DQ92854 862 aa11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 JPH1Q9HDC5 661 aaPredicted RBP11.22□□□□□ -0.61
CPSF1P1-201ENST00000397477 COG5Q9UP83 839 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms