RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 CDH22Q9UJ99 828 aa9.83□□□□□ -0.84
CAPN3-208ENST00000397204 KIAA1671Q9BY89 1806 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 DMDP11532 3685 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 ZNF292O60281 2723 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-208ENST00000397204 RNF223E7ERA6 249 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 CDC45O75419 566 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 OFD1O75665 1012 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 CPA1P15085 419 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 EPCAMP16422 314 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 PSMA5P28066 241 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 PDIA3P30101 505 aaKnown RBP9.82□□□□□ -0.84
CAPN3-208ENST00000397204 NBL1P41271 181 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 NLRP5P59047 1200 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 FOXK2Q01167 660 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 RNASELQ05823 741 aaKnown RBP9.82□□□□□ -0.84
CAPN3-208ENST00000397204 DRP2Q13474 957 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 MTERF2Q49AM1 385 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 OTOP3Q7RTS5 596 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 CATSPER4Q7RTX7 472 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 MRPL10Q7Z7H8 261 aaKnown RBP9.82□□□□□ -0.84
CAPN3-208ENST00000397204 GPR149Q86SP6 731 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 CABP7Q86V35 215 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 RHPN2Q8IUC4 686 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 FAM177A1Q8N128 213 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-208ENST00000397204 TMEM105Q8N8V8 129 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 TDRD5Q8NAT2 981 aaKnown RBP9.82□□□□□ -0.84
CAPN3-208ENST00000397204 TBCKQ8TEA7 893 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 AUTS2Q8WXX7 1259 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 THAP11Q96EK4 314 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 JAKMIP1Q96N16 626 aaKnown RBP9.82□□□□□ -0.84
CAPN3-208ENST00000397204 SLC26A6Q9BXS9 759 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 EMILIN2Q9BXX0 1053 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 FAM105AQ9NUU6 356 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 TBC1D13Q9NVG8 400 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 VPS54Q9P1Q0 977 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 DBR1Q9UK59 544 aaKnown RBP9.82□□□□□ -0.84
CAPN3-208ENST00000397204 PCDHA4Q9UN74 947 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 SNX14Q9Y5W7 946 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 NID2Q14112 1375 aa9.82□□□□□ -0.84
CAPN3-208ENST00000397204 MYH9P35579 1960 aaKnown RBP9.81□□□□□ -0.84
CAPN3-208ENST00000397204 DKC1O60832 514 aaKnown RBP eCLIP9.81□□□□□ -0.84
CAPN3-208ENST00000397204 LILRB3O75022 631 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 ASGR2P07307 311 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 WEE2P0C1S8 567 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 RPS6KB1P23443 525 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 KLRC2P26717 231 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 HSPA4P34932 840 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 USP46P62068 366 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 PSMC5P62195 406 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 TDGQ13569 410 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 GALNT17Q6IS24 598 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 KANK3Q6NY19 840 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 MOXD1Q6UVY6 613 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 TMC5Q6UXY8 1006 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 CYP26C1Q6V0L0 522 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 RNF19BQ6ZMZ0 732 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 CENPQQ7L2Z9 268 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-208ENST00000397204 TMEM173Q86WV6 379 aaPredicted RBP9.81□□□□□ -0.84
CAPN3-208ENST00000397204 TRIM22Q8IYM9 498 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 URGCPQ8TCY9 931 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 LPPQ93052 612 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 MBOAT7Q96N66 472 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 TMEM175Q9BSA9 504 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 SLC6A16Q9GZN6 736 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 MFSD1Q9H3U5 465 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 IFT122Q9HBG6 1241 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 DPP7Q9UHL4 492 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 PIN4Q9Y237 131 aaKnown RBP9.81□□□□□ -0.84
CAPN3-208ENST00000397204 SSX2IPQ9Y2D8 614 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 FAN1Q9Y2M0 1017 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 PPME1Q9Y570 386 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 PCDHB2Q9Y5E7 798 aa9.81□□□□□ -0.84
CAPN3-208ENST00000397204 ASAP2O43150 1006 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 C1RP00736 705 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 CNPP09543 421 aaKnown RBP9.8□□□□□ -0.84
CAPN3-208ENST00000397204 QARSP47897 775 aaKnown RBP9.8□□□□□ -0.84
CAPN3-208ENST00000397204 SLC11A1P49279 550 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 CLCN4P51793 760 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 GUCA2AQ02747 115 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 SSRP1Q08945 709 aaKnown RBP9.8□□□□□ -0.84
CAPN3-208ENST00000397204 PTPN14Q15678 1187 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 LONRF3Q496Y0 759 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 AGMOQ6ZNB7 445 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 C15orf39Q6ZRI6 1047 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 CCDC149Q6ZUS6 474 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 ANO5Q75V66 913 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 SRGAP1Q7Z6B7 1085 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 ZNF280BQ86YH2 543 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 KSR1Q8IVT5 923 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 BLIDQ8IZY5 108 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 CNNM3Q8NE01 707 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 CMASQ8NFW8 434 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-208ENST00000397204 ETNPPLQ8TBG4 499 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 BCL7CQ8WUZ0 217 aaPredicted RBP9.8□□□□□ -0.84
CAPN3-208ENST00000397204 PRPF31Q8WWY3 499 aaKnown RBP9.8□□□□□ -0.84
CAPN3-208ENST00000397204 SLC7A3Q8WY07 619 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 GJA10Q969M2 543 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 FAM20AQ96MK3 541 aa9.8□□□□□ -0.84
CAPN3-208ENST00000397204 KLHL5Q96PQ7 755 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms