RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 NT5C3AQ9H0P0 336 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 UBN1Q9NPG3 1134 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 COL4A3BPQ9Y5P4 624 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 NUMBLQ9Y6R0 609 aa16.77■□□□□ 0.28
SEC13-206ENST00000397102 NID2Q14112 1375 aa16.77■□□□□ 0.27
SEC13-206ENST00000397102 DDX11L8A8MPP1 907 aa16.76■□□□□ 0.27
SEC13-206ENST00000397102 HOXA11P31270 313 aaPredicted RBP16.76■□□□□ 0.27
SEC13-206ENST00000397102 OR1G1P47890 313 aa16.76■□□□□ 0.27
SEC13-206ENST00000397102 ZNF528Q3MIS6 628 aa16.76■□□□□ 0.27
SEC13-206ENST00000397102 ADCK5Q3MIX3 580 aa16.76■□□□□ 0.27
SEC13-206ENST00000397102 TSGA10IPQ3SY00 556 aa16.76■□□□□ 0.27
SEC13-206ENST00000397102 Q4G0T1 1027 aa16.76■□□□□ 0.27
SEC13-206ENST00000397102 ANO5Q75V66 913 aa16.76■□□□□ 0.27
SEC13-206ENST00000397102 SRGAP1Q7Z6B7 1085 aa16.76■□□□□ 0.27
SEC13-206ENST00000397102 MAML2Q8IZL2 1156 aaPredicted RBP16.76■□□□□ 0.27
SEC13-206ENST00000397102 PHKBQ93100 1093 aa16.76■□□□□ 0.27
SEC13-206ENST00000397102 CNTNAP3BQ96NU0 1288 aa16.76■□□□□ 0.27
SEC13-206ENST00000397102 CNTNAP3Q9BZ76 1288 aa16.76■□□□□ 0.27
SEC13-206ENST00000397102 PRKD2Q9BZL6 878 aa16.76■□□□□ 0.27
SEC13-206ENST00000397102 ZFP37Q9Y6Q3 630 aaPredicted RBP16.76■□□□□ 0.27
SEC13-206ENST00000397102 WDR87Q6ZQQ6 2873 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 SPTLC1O15269 473 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 GAS2O43903 313 aaKnown RBP16.75■□□□□ 0.27
SEC13-206ENST00000397102 SPATA31D3P0C874 917 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 ITGA4P13612 1032 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 SDHBP21912 280 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 PSMC5P62195 406 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 AKAP17AQ02040 695 aaKnown RBP16.75■□□□□ 0.27
SEC13-206ENST00000397102 DSC1Q08554 894 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 SPATA31D4Q6ZUB0 917 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 PALB2Q86YC2 1186 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 GPR65Q8IYL9 337 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 SMG8Q8ND04 991 aaKnown RBP16.75■□□□□ 0.27
SEC13-206ENST00000397102 MINDY3Q9H8M7 445 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.75■□□□□ 0.27
SEC13-206ENST00000397102 CHST7Q9NS84 486 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 FBXO4Q9UKT5 387 aa16.75■□□□□ 0.27
SEC13-206ENST00000397102 TGM5O43548 720 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 LRRN2O75325 713 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 KRT37O76014 449 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 HMGB1P09429 215 aaKnown RBP16.74■□□□□ 0.27
SEC13-206ENST00000397102 KRT32Q14532 448 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 VARS2Q5ST30 1063 aaKnown RBP16.74■□□□□ 0.27
SEC13-206ENST00000397102 PLA2G4FQ68DD2 849 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 EXOC8Q8IYI6 725 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 RASEFQ8IZ41 740 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 GPR161Q8N6U8 529 aaKnown RBP16.74■□□□□ 0.27
SEC13-206ENST00000397102 TBCKQ8TEA7 893 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 PSPC1Q8WXF1 523 aaKnown RBP16.74■□□□□ 0.27
SEC13-206ENST00000397102 SLC7A3Q8WY07 619 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 C22orf23Q9BZE7 217 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 FNIP2Q9P278 1114 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 NCDNQ9UBB6 729 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 DOCK6Q96HP0 2047 aa16.74■□□□□ 0.27
SEC13-206ENST00000397102 CYP3A7-CYP3A51PA0A087WV96 503 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 KANSL1LA0AUZ9 987 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 ARL5CA6NH57 179 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 NR1I2O75469 434 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 SRGAP2CP0DJJ0 459 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 CYP3A7P24462 503 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 GPC5P78333 572 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 FGD1P98174 961 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 LILRA6Q6PI73 481 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 PRPF31Q8WWY3 499 aaKnown RBP16.73■□□□□ 0.27
SEC13-206ENST00000397102 FGF14Q92915 247 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 GAD1Q99259 594 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 DDX23Q9BUQ8 820 aaKnown RBP16.73■□□□□ 0.27
SEC13-206ENST00000397102 COLEC11Q9BWP8 271 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 RNF26Q9BY78 433 aaPredicted RBP16.73■□□□□ 0.27
SEC13-206ENST00000397102 BCO2Q9BYV7 579 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 DHX33Q9H6R0 707 aaKnown RBP16.73■□□□□ 0.27
SEC13-206ENST00000397102 VPS54Q9P1Q0 977 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 PPME1Q9Y570 386 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 IPPQ9Y573 584 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 ARID2Q68CP9 1835 aa16.73■□□□□ 0.27
SEC13-206ENST00000397102 COL4A3Q01955 1670 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 F8W810 466 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 LAMTOR5O43504 91 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 ZMYND10O75800 440 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 TDP2O95551 362 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 FSHRP23945 695 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 MLH1P40692 756 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 SCNN1GP51170 649 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 NPEPPSP55786 919 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 CREMQ03060 361 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 PRKCQQ04759 706 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 USP41Q3LFD5 358 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 FUT10Q6P4F1 479 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 GLYCTKQ8IVS8 523 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 ST13P5Q8NFI4 369 aaPredicted RBP16.72■□□□□ 0.27
SEC13-206ENST00000397102 ETNPPLQ8TBG4 499 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 MBOAT7Q96N66 472 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 RPP25Q9BUL9 199 aaKnown RBP16.72■□□□□ 0.27
SEC13-206ENST00000397102 OSBPL6Q9BZF3 934 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 SPATA6Q9NWH7 488 aaPredicted RBP16.72■□□□□ 0.27
SEC13-206ENST00000397102 MIOSQ9NXC5 875 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 PCDHGA2Q9Y5H1 932 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 KMT2BQ9UMN6 2715 aaPredicted RBP16.72■□□□□ 0.27
SEC13-206ENST00000397102 GPR179Q6PRD1 2367 aa16.72■□□□□ 0.27
SEC13-206ENST00000397102 EPG5Q9HCE0 2579 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms