RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 BCAS3Q9H6U6 928 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 APEX2Q9UBZ4 518 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 SNX24Q9Y343 169 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 ALG6Q9Y672 507 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 CNTNAP1P78357 1384 aa14.36□□□□□ -0.11
TRIM40-207ENST00000396581 FOSP01100 380 aaPredicted RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 RARGP13631 454 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 ABCB4P21439 1286 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 RPL21P46778 160 aaKnown RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 PRELPP51888 382 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 IFI35P80217 286 aaPredicted RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 CTTNQ14247 550 aaKnown RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 ABCB5Q2M3G0 1257 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 CBWD6Q4V339 395 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 CBWD3Q5JTY5 395 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 CBWD5Q5RIA9 395 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 CHADLQ6NUI6 762 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 RPS6KC1Q96S38 1066 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 AZI2Q9H6S1 392 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 VEZTQ9HBM0 779 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 NOD2Q9HC29 1040 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 MYOZ2Q9NPC6 264 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 INTS9Q9NV88 658 aaKnown RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 TAS2R14Q9NYV8 317 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 RABGAP1Q9Y3P9 1069 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 MSH4O15457 936 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 RIPK2O43353 540 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 MTA2O94776 668 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 EEF2P13639 858 aaKnown RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 TNFAIP3P21580 790 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 COPB2P35606 906 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 ZNF211Q13398 564 aaPredicted RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 PRPF4BQ13523 1007 aaKnown RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 SLMAPQ14BN4 828 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 C1orf186Q6ZWK4 172 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 TRPM8Q7Z2W7 1104 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 ZDHHC14Q8IZN3 488 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 LMO3Q8TAP4 145 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 ART4Q93070 314 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 C18orf8Q96DM3 657 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 SELENOSQ9BQE4 189 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 EIF2AK1Q9BQI3 630 aaKnown RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 ROPN1BQ9BZX4 212 aaPredicted RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 INTS2Q9H0H0 1204 aaKnown RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 STMN4Q9H169 189 aaPredicted RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 SEMA4AQ9H3S1 761 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 EBF2Q9HAK2 575 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 ROPN1Q9HAT0 212 aaPredicted RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 SAMD15Q9P1V8 674 aa14.35□□□□□ -0.11
TRIM40-207ENST00000396581 MTRF1LQ9UGC7 380 aaKnown RBP14.35□□□□□ -0.11
TRIM40-207ENST00000396581 TBC1D12O60347 775 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 CYP3A4P08684 503 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 ALADP13716 330 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 PEX5P50542 639 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 ZNF131P52739 623 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 AUHQ13825 339 aaKnown RBP14.34□□□□□ -0.11
TRIM40-207ENST00000396581 ZNF268Q14587 947 aaPredicted RBP14.34□□□□□ -0.11
TRIM40-207ENST00000396581 CNGA2Q16280 664 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 SHROOM1Q2M3G4 852 aaPredicted RBP14.34□□□□□ -0.11
TRIM40-207ENST00000396581 TTC27Q6P3X3 843 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 CYFIP1Q7L576 1253 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 CEP57Q86XR8 500 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 PALB2Q86YC2 1186 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 MORC4Q8TE76 937 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 N4BP2L2Q92802 583 aaPredicted RBP14.34□□□□□ -0.11
TRIM40-207ENST00000396581 VTI1AQ96AJ9 217 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 MIEF2Q96C03 454 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 RUNDC3BQ96NL0 473 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 SCLT1Q96NL6 688 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 HSD17B14Q9BPX1 270 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 ZSWIM1Q9BR11 485 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 SPON1Q9HCB6 807 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 GOPCQ9HD26 462 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 SEL1LQ9UBV2 794 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 PGAP2Q9UHJ9 254 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 CEP83Q9Y592 693 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 SNX3O60493 162 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 RRP1BQ14684 758 aaKnown RBP14.34□□□□□ -0.11
TRIM40-207ENST00000396581 GALNTL6Q49A17 601 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 RBM26Q5T8P6 1007 aaKnown RBP14.34□□□□□ -0.11
TRIM40-207ENST00000396581 HIBCHQ6NVY1 386 aaPredicted RBP14.34□□□□□ -0.11
TRIM40-207ENST00000396581 SLC9A9Q8IVB4 645 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 UBL4BQ8N7F7 174 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 CCDC63Q8NA47 563 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 CD101Q93033 1021 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 PRMT1Q99873 361 aaKnown RBP14.34□□□□□ -0.11
TRIM40-207ENST00000396581 AGPAT1Q99943 283 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 NSRP1Q9H0G5 558 aaKnown RBP14.34□□□□□ -0.11
TRIM40-207ENST00000396581 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRIM40-207ENST00000396581 TUFT1Q9NNX1 390 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 TMOD4Q9NZQ9 345 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 SUFUQ9UMX1 484 aa14.34□□□□□ -0.11
TRIM40-207ENST00000396581 EML1O00423 815 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 CHRM1P11229 460 aaPredicted RBP14.33□□□□□ -0.12
TRIM40-207ENST00000396581 PDE6CP51160 858 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 JAG1P78504 1218 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 MAP3K10Q02779 954 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 ICA1Q05084 483 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 MYBPC2Q14324 1141 aa14.33□□□□□ -0.12
TRIM40-207ENST00000396581 CRYMQ14894 314 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms