RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 CEP89Q96ST8 783 aa15.47■□□□□ 0.07
VCPKMT-201ENST00000395859 IER2Q9BTL4 223 aa15.47■□□□□ 0.07
VCPKMT-201ENST00000395859 RXFP3Q9NSD7 469 aa15.47■□□□□ 0.07
VCPKMT-201ENST00000395859 FNIP2Q9P278 1114 aa15.47■□□□□ 0.07
VCPKMT-201ENST00000395859 SDK1Q7Z5N4 2213 aa15.47■□□□□ 0.07
VCPKMT-201ENST00000395859 DDAH1O94760 285 aa15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 DSC1Q08554 894 aa15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 TARBP2Q15633 366 aaKnown RBP15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 IL31Q6EBC2 164 aa15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 POTEHQ6S545 545 aa15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 ZNF852Q6ZMS4 543 aa15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 GRASPQ7Z6J2 395 aaPredicted RBP15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 PALB2Q86YC2 1186 aa15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 CKAP2LQ8IYA6 745 aa15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 ZNF654Q8IZM8 581 aa15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 CMTR1Q8N1G2 835 aaKnown RBP15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 FAM167AQ96KS9 214 aa15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 KXD1Q9BQD3 176 aa15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 ANO3Q9BYT9 981 aa15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 KANSL3Q9P2N6 904 aa15.46■□□□□ 0.07
VCPKMT-201ENST00000395859 IGKV6-21A0A0C4DH24 114 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 F8W810 466 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 IPO5O00410 1097 aaKnown RBP15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 KCNK5O95279 499 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 CYP21A2P08686 494 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 SIM2Q14190 667 aaPredicted RBP15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 PRR23BQ6ZRT6 265 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 TRMT1LQ7Z2T5 733 aaKnown RBP15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 SMAP1Q8IYB5 467 aaPredicted RBP15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 CTCFLQ8NI51 663 aaPredicted RBP15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 ITFG1Q8TB96 612 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 URGCPQ8TCY9 931 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 NLRP7Q8WX94 980 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 PHF20Q9BVI0 1012 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 LSM14BQ9BX40 385 aaKnown RBP15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 GCOM2Q9BZD3 368 aaPredicted RBP15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 PLA2G2FQ9BZM2 168 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 RIC8AQ9NPQ8 531 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 HEBP1Q9NRV9 189 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 FBXW11Q9UKB1 542 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 PIN4Q9Y237 131 aaKnown RBP15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 PCDHB2Q9Y5E7 798 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 PCDHA10Q9Y5I2 948 aa15.45■□□□□ 0.06
VCPKMT-201ENST00000395859 CNTNAP2Q9UHC6 1331 aa15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 hCG_1642624A0A1W2PR95 340 aa15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 ERICH2A1L162 156 aa15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 SRRM3A6NNA2 597 aaPredicted RBP15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 TAF4O00268 1085 aa15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 FOSP01100 380 aaPredicted RBP15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 KCNA4P22459 653 aa15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 SFPQP23246 707 aaKnown RBP eCLIP15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 CLK2P49760 499 aaKnown RBP15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 TRDNQ13061 729 aa15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 GAS6Q14393 721 aa15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 PGBD4Q96DM1 585 aa15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 B3GALT6Q96L58 329 aa15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 RSAD1Q9HA92 442 aa15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 GABBR1Q9UBS5 961 aa15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 MRPS17Q9Y2R5 130 aaKnown RBP15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 PRG3Q9Y2Y8 225 aaPredicted RBP15.44■□□□□ 0.06
VCPKMT-201ENST00000395859 A0A087WZ62 844 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 ECI2O75521 394 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 PAPSS2O95340 614 aaPredicted RBP15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 POMCP01189 267 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 OATP04181 439 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 POU2F2P09086 479 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 HNRNPA1P09651 372 aaKnown RBP eCLIP15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 HOXA9P31269 272 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 CNR2P34972 360 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 GNAQP50148 359 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 CCR3P51677 355 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 CDC42EP1Q00587 391 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 RING1Q06587 406 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 SRSF5Q13243 272 aaKnown RBP15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 UBXN11Q5T124 520 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 PLA2G4DQ86XP0 818 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 NPAS3Q8IXF0 933 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 MB21D2Q8IYB1 491 aaPredicted RBP15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 GATA6Q92908 595 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 FDXACB1Q9BRP7 624 aaPredicted RBP15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 GPR62Q9BZJ7 368 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 OSBPL3Q9H4L5 887 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 DIAPH3Q9NSV4 1193 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 AGPAT5Q9NUQ2 364 aa15.43■□□□□ 0.06
VCPKMT-201ENST00000395859 SPAG17Q6Q759 2223 aa15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 TMEM8BA6NDV4 472 aa15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 K7ESF4 209 aa15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 PSAPP07602 524 aa15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 CYP3A4P08684 503 aa15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 ZNF806P0C7X5 589 aa15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 HOXA11P31270 313 aaPredicted RBP15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 SATB1Q01826 763 aa15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 PPP2R5DQ14738 602 aa15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 SART3Q15020 963 aaKnown RBP15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 WWC2Q6AWC2 1192 aa15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 ZNF410Q86VK4 478 aa15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 FAM160A2Q8N612 972 aaPredicted RBP15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 DNASE1L2Q92874 299 aa15.42■□□□□ 0.06
VCPKMT-201ENST00000395859 SCLT1Q96NL6 688 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms