RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 GDF6Q6KF10 455 aaPredicted RBP14.94□□□□□ -0.02
VAPB-202ENST00000395802 TSHZ1Q6ZSZ6 1077 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 TAS1R3Q7RTX0 852 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 TCHPQ9BT92 498 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.94□□□□□ -0.02
VAPB-202ENST00000395802 MROH7Q68CQ1 1323 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 GPR32O75388 356 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 AKAP3O75969 853 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 PTMAP06454 111 aaKnown RBP14.94□□□□□ -0.02
VAPB-202ENST00000395802 EIF4BP23588 611 aaKnown RBP14.94□□□□□ -0.02
VAPB-202ENST00000395802 NR1I3Q14994 352 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 KYAT1Q16773 422 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 KIZQ2M2Z5 673 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 RUFY4Q6ZNE9 571 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 GPD1LQ8N335 351 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 SPC24Q8NBT2 197 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 CBWD1Q9BRT8 395 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 ADAMTS10Q9H324 1103 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 RTN4Q9NQC3 1192 aaKnown RBP14.94□□□□□ -0.02
VAPB-202ENST00000395802 GINS2Q9Y248 185 aa14.94□□□□□ -0.02
VAPB-202ENST00000395802 CNTNAP2Q9UHC6 1331 aa14.93□□□□□ -0.02
VAPB-202ENST00000395802 ARVCFO00192 962 aa14.93□□□□□ -0.02
VAPB-202ENST00000395802 SGPL1O95470 568 aa14.93□□□□□ -0.02
VAPB-202ENST00000395802 TFRCP02786 760 aaKnown RBP14.93□□□□□ -0.02
VAPB-202ENST00000395802 AXLP30530 894 aa14.93□□□□□ -0.02
VAPB-202ENST00000395802 ZNF200P98182 395 aaPredicted RBP14.93□□□□□ -0.02
VAPB-202ENST00000395802 VWA3BQ502W6 1294 aa14.93□□□□□ -0.02
VAPB-202ENST00000395802 ATF7IP2Q5U623 682 aa14.93□□□□□ -0.02
VAPB-202ENST00000395802 ACO2Q99798 780 aaKnown RBP14.93□□□□□ -0.02
VAPB-202ENST00000395802 ADPGKQ9BRR6 497 aa14.93□□□□□ -0.02
VAPB-202ENST00000395802 TARS2Q9BW92 718 aaKnown RBP14.93□□□□□ -0.02
VAPB-202ENST00000395802 VPS16Q9H269 839 aa14.93□□□□□ -0.02
VAPB-202ENST00000395802 TAB2Q9NYJ8 693 aa14.93□□□□□ -0.02
VAPB-202ENST00000395802 AGO2Q9UKV8 859 aaKnown RBP14.93□□□□□ -0.02
VAPB-202ENST00000395802 TNFSF13BQ9Y275 285 aa14.93□□□□□ -0.02
VAPB-202ENST00000395802 GRIN2DO15399 1336 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 ZNF233A6NK53 670 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 LGALS16A8MUM7 142 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 ANKRD63C9JTQ0 380 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 EXTL3O43909 919 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 STX10O60499 249 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 MYCP01106 439 aaPredicted RBP14.92□□□□□ -0.02
VAPB-202ENST00000395802 DARSP14868 501 aaKnown RBP14.92□□□□□ -0.02
VAPB-202ENST00000395802 ADSSP30520 456 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 MRPS6P82932 125 aaKnown RBP14.92□□□□□ -0.02
VAPB-202ENST00000395802 UBXN1Q04323 297 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 HIC1Q14526 733 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 SNRNP35Q16560 246 aaKnown RBP14.92□□□□□ -0.02
VAPB-202ENST00000395802 MPZL3Q6UWV2 235 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 APTXQ7Z2E3 356 aaKnown RBP14.92□□□□□ -0.02
VAPB-202ENST00000395802 TRIM59Q8IWR1 403 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 ANKLE1Q8NAG6 615 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 SLC43A3Q8NBI5 491 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 FBXL18Q96ME1 805 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 NAP1L5Q96NT1 182 aaPredicted RBP14.92□□□□□ -0.02
VAPB-202ENST00000395802 MSTO1Q9BUK6 570 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 CELF4Q9BZC1 486 aaKnown RBP14.92□□□□□ -0.02
VAPB-202ENST00000395802 CRISPLD2Q9H0B8 497 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 NDST4Q9H3R1 872 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 PCIF1Q9H4Z3 704 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 ANKFY1Q9P2R3 1169 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 IMPACTQ9P2X3 320 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 FRMPD3Q5JV73 1810 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 A0A0B4J269 797 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 TMEM62Q0P6H9 643 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 CETN1Q12798 172 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 NOLC1Q14978 699 aaKnown RBP eCLIP14.92□□□□□ -0.02
VAPB-202ENST00000395802 CATSPER4Q7RTX7 472 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 CCDC155Q8N6L0 562 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 U2AF1L4Q8WU68 220 aaKnown RBP14.92□□□□□ -0.02
VAPB-202ENST00000395802 IQCDQ96DY2 449 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 OSMRQ99650 979 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 PRDM10Q9NQV6 1147 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 TRPV2Q9Y5S1 764 aa14.92□□□□□ -0.02
VAPB-202ENST00000395802 SIP14410 1827 aa14.91□□□□□ -0.02
VAPB-202ENST00000395802 A0A1W2PQC6 194 aa14.91□□□□□ -0.02
VAPB-202ENST00000395802 TPM1P09493 284 aa14.91□□□□□ -0.02
VAPB-202ENST00000395802 POU5F1Q01860 360 aaKnown RBP14.91□□□□□ -0.02
VAPB-202ENST00000395802 MCL1Q07820 350 aa14.91□□□□□ -0.02
VAPB-202ENST00000395802 BFSP1Q12934 665 aa14.91□□□□□ -0.02
VAPB-202ENST00000395802 TCERG1LQ5VWI1 586 aa14.91□□□□□ -0.02
VAPB-202ENST00000395802 SPECC1LQ69YQ0 1117 aa14.91□□□□□ -0.02
VAPB-202ENST00000395802 SLC39A4Q6P5W5 647 aa14.91□□□□□ -0.02
VAPB-202ENST00000395802 FAM43BQ6ZT52 329 aaPredicted RBP14.91□□□□□ -0.02
VAPB-202ENST00000395802 PPP1R16BQ96T49 567 aa14.91□□□□□ -0.02
VAPB-202ENST00000395802 TMEM106CQ9BVX2 250 aa14.91□□□□□ -0.02
VAPB-202ENST00000395802 MINDY3Q9H8M7 445 aa14.91□□□□□ -0.02
VAPB-202ENST00000395802 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.91□□□□□ -0.024e-13■□□□□ 9.8
VAPB-202ENST00000395802 A0A1B0GUA9 196 aa14.9□□□□□ -0.02
VAPB-202ENST00000395802 N4BP1O75113 896 aaKnown RBP14.9□□□□□ -0.02
VAPB-202ENST00000395802 AFPP02771 609 aaKnown RBP14.9□□□□□ -0.02
VAPB-202ENST00000395802 PROZP22891 400 aa14.9□□□□□ -0.02
VAPB-202ENST00000395802 THPOP40225 353 aa14.9□□□□□ -0.02
VAPB-202ENST00000395802 CASP4P49662 377 aa14.9□□□□□ -0.02
VAPB-202ENST00000395802 SNX17Q15036 470 aa14.9□□□□□ -0.02
VAPB-202ENST00000395802 ZNF568Q3ZCX4 644 aa14.9□□□□□ -0.02
VAPB-202ENST00000395802 DCAF17Q5H9S7 520 aaPredicted RBP14.9□□□□□ -0.02
VAPB-202ENST00000395802 NOTUMQ6P988 496 aa14.9□□□□□ -0.02
VAPB-202ENST00000395802 VSTM4Q8IW00 320 aa14.9□□□□□ -0.02
VAPB-202ENST00000395802 USP38Q8NB14 1042 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms