RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 BRF1Q92994 677 aa17.73■□□□□ 0.43
SNCA-205ENST00000394991 NXPE3Q969Y0 559 aa17.73■□□□□ 0.43
SNCA-205ENST00000394991 KANSL3Q9P2N6 904 aa17.73■□□□□ 0.43
SNCA-205ENST00000394991 KMT2BQ9UMN6 2715 aaPredicted RBP17.72■□□□□ 0.43
SNCA-205ENST00000394991 ANHXE9PGG2 379 aa17.72■□□□□ 0.43
SNCA-205ENST00000394991 EML1O00423 815 aa17.72■□□□□ 0.43
SNCA-205ENST00000394991 NCLP19338 710 aaKnown RBP17.72■□□□□ 0.43
SNCA-205ENST00000394991 OR1G1P47890 313 aa17.72■□□□□ 0.43
SNCA-205ENST00000394991 IRX6P78412 446 aaPredicted RBP17.72■□□□□ 0.43
SNCA-205ENST00000394991 DSC1Q08554 894 aa17.72■□□□□ 0.43
SNCA-205ENST00000394991 HTR4Q13639 388 aa17.72■□□□□ 0.43
SNCA-205ENST00000394991 KRT32Q14532 448 aa17.72■□□□□ 0.43
SNCA-205ENST00000394991 PUM1Q14671 1186 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNCA-205ENST00000394991 GET4Q7L5D6 327 aaPredicted RBP17.72■□□□□ 0.43
SNCA-205ENST00000394991 SLC26A6Q9BXS9 759 aa17.72■□□□□ 0.43
SNCA-205ENST00000394991 RNF26Q9BY78 433 aaPredicted RBP17.72■□□□□ 0.43
SNCA-205ENST00000394991 FOXQ1Q9C009 403 aa17.72■□□□□ 0.43
SNCA-205ENST00000394991 MIOSQ9NXC5 875 aa17.72■□□□□ 0.43
SNCA-205ENST00000394991 SSX2IPQ9Y2D8 614 aa17.72■□□□□ 0.43
SNCA-205ENST00000394991 SIT1Q9Y3P8 196 aa17.72■□□□□ 0.43
SNCA-205ENST00000394991 NOTCH4Q99466 2003 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 ACACBO00763 2458 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 CYP3A7-CYP3A51PA0A087WV96 503 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 LRRN2O75325 713 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 LAMP2P13473 410 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 CYP3A7P24462 503 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 PSMC5P62195 406 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 FGD1P98174 961 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 DSG1Q02413 1049 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 SRGAP1Q7Z6B7 1085 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 C1orf210Q8IVY1 113 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 MAML2Q8IZL2 1156 aaPredicted RBP17.71■□□□□ 0.43
SNCA-205ENST00000394991 SUMF1Q8NBK3 374 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 RUBCNQ92622 972 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 TMEM143Q96AN5 459 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 B3GALT6Q96L58 329 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 MBOAT7Q96N66 472 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 HINFPQ9BQA5 517 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 JPH2Q9BR39 696 aaPredicted RBP17.71■□□□□ 0.43
SNCA-205ENST00000394991 EIF2AQ9BY44 585 aaKnown RBP17.71■□□□□ 0.43
SNCA-205ENST00000394991 NT5C3AQ9H0P0 336 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 RNF39Q9H2S5 420 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 SLC2A4RGQ9NR83 387 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 DLL3Q9NYJ7 618 aa17.71■□□□□ 0.43
SNCA-205ENST00000394991 WRAP73Q9P2S5 460 aaPredicted RBP17.71■□□□□ 0.43
SNCA-205ENST00000394991 HMGB1P09429 215 aaKnown RBP17.7■□□□□ 0.42
SNCA-205ENST00000394991 SRGAP2CP0DJJ0 459 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 ITGA4P13612 1032 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 MLH1P40692 756 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 AKAP17AQ02040 695 aaKnown RBP17.7■□□□□ 0.42
SNCA-205ENST00000394991 ELMSAN1Q6PJG2 1045 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 DCLRE1AQ6PJP8 1040 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 ZC3H14Q6PJT7 736 aaKnown RBP17.7■□□□□ 0.42
SNCA-205ENST00000394991 PALB2Q86YC2 1186 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 PJA1Q8NG27 643 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 HDAC7Q8WUI4 952 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 PRPF31Q8WWY3 499 aaKnown RBP17.7■□□□□ 0.42
SNCA-205ENST00000394991 GAD1Q99259 594 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 RPP25Q9BUL9 199 aaKnown RBP17.7■□□□□ 0.42
SNCA-205ENST00000394991 DHX33Q9H6R0 707 aaKnown RBP17.7■□□□□ 0.42
SNCA-205ENST00000394991 CHST7Q9NS84 486 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 BMP2KQ9NSY1 1161 aaPredicted RBP17.7■□□□□ 0.42
SNCA-205ENST00000394991 DPP7Q9UHL4 492 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 IPPQ9Y573 584 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 NUMBLQ9Y6R0 609 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 VWA8A3KMH1 1905 aa17.7■□□□□ 0.42
SNCA-205ENST00000394991 ARL5CA6NH57 179 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 M0R2N6 131 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 TGM5O43548 720 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 IFNAR1P17181 557 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 SCNN1GP51170 649 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 NLRP5P59047 1200 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 LAMTOR4Q0VGL1 99 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 LILRA6Q6PI73 481 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 SKAP1Q86WV1 359 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 GLYCTKQ8IVS8 523 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 PSPC1Q8WXF1 523 aaKnown RBP17.69■□□□□ 0.42
SNCA-205ENST00000394991 ZFP42Q96MM3 310 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 GPR62Q9BZJ7 368 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 PRKD2Q9BZL6 878 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 PLEKHA4Q9H4M7 779 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 PIDD1Q9HB75 910 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 ZDHHC7Q9NXF8 308 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.69■□□□□ 0.42
SNCA-205ENST00000394991 HES2Q9Y543 173 aa17.69■□□□□ 0.42
SNCA-205ENST00000394991 SLC37A4O43826 429 aa17.68■□□□□ 0.42
SNCA-205ENST00000394991 GAS2O43903 313 aaKnown RBP17.68■□□□□ 0.42
SNCA-205ENST00000394991 RPL17P18621 184 aaKnown RBP17.68■□□□□ 0.42
SNCA-205ENST00000394991 CNNM3Q8NE01 707 aa17.68■□□□□ 0.42
SNCA-205ENST00000394991 SLC7A3Q8WY07 619 aa17.68■□□□□ 0.42
SNCA-205ENST00000394991 CEP170P1Q96L14 293 aa17.68■□□□□ 0.42
SNCA-205ENST00000394991 NCOA5Q9HCD5 579 aaKnown RBP17.68■□□□□ 0.42
SNCA-205ENST00000394991 UBN1Q9NPG3 1134 aa17.68■□□□□ 0.42
SNCA-205ENST00000394991 SH3GLB2Q9NR46 395 aa17.68■□□□□ 0.42
SNCA-205ENST00000394991 VAV3Q9UKW4 847 aa17.68■□□□□ 0.42
SNCA-205ENST00000394991 PCDHA4Q9UN74 947 aa17.68■□□□□ 0.42
SNCA-205ENST00000394991 TSPAN1O60635 241 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 C1RP00736 705 aa17.67■□□□□ 0.42
SNCA-205ENST00000394991 QARSP47897 775 aaKnown RBP17.67■□□□□ 0.42
SNCA-205ENST00000394991 STARD6P59095 220 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms