RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 CREMQ03060 361 aa22.04■■□□□ 1.12
UPK3B-203ENST00000394849 COLGALT2Q8IYK4 626 aa22.04■■□□□ 1.12
UPK3B-203ENST00000394849 FBXL16Q8N461 479 aa22.04■■□□□ 1.12
UPK3B-203ENST00000394849 GPR152Q8TDT2 470 aa22.04■■□□□ 1.12
UPK3B-203ENST00000394849 TBCKQ8TEA7 893 aa22.04■■□□□ 1.12
UPK3B-203ENST00000394849 PHKBQ93100 1093 aa22.04■■□□□ 1.12
UPK3B-203ENST00000394849 MYADMQ96S97 322 aa22.04■■□□□ 1.12
UPK3B-203ENST00000394849 SH2D3AQ9BRG2 576 aa22.04■■□□□ 1.12
UPK3B-203ENST00000394849 ANHXE9PGG2 379 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 ASAP2O43150 1006 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 EFEMP2O95967 443 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 ITGA4P13612 1032 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 AXLP30530 894 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 HOXA11P31270 313 aaPredicted RBP22.03■■□□□ 1.12
UPK3B-203ENST00000394849 NLRP5P59047 1200 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 NCBP1Q09161 790 aaKnown RBP22.03■■□□□ 1.12
UPK3B-203ENST00000394849 DCLRE1AQ6PJP8 1040 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 RIN2Q8WYP3 895 aaPredicted RBP22.03■■□□□ 1.12
UPK3B-203ENST00000394849 CCDC51Q96ER9 411 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 COLEC11Q9BWP8 271 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 NT5C3AQ9H0P0 336 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 MARCH5Q9NX47 278 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 DLL3Q9NYJ7 618 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 DLGAP2Q9P1A6 1054 aa22.03■■□□□ 1.12
UPK3B-203ENST00000394849 PRG3Q9Y2Y8 225 aaPredicted RBP22.03■■□□□ 1.12
UPK3B-203ENST00000394849 MED19A0JLT2 244 aaPredicted RBP22.02■■□□□ 1.12
UPK3B-203ENST00000394849 RFPL2O75678 378 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 IFNAR1P17181 557 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 SDHBP21912 280 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 RFC5P40937 340 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 OR1G1P47890 313 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 QARSP47897 775 aaKnown RBP22.02■■□□□ 1.12
UPK3B-203ENST00000394849 AFF1P51825 1210 aaKnown RBP22.02■■□□□ 1.12
UPK3B-203ENST00000394849 SPECC1Q5M775 1068 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 UBXN11Q5T124 520 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 Q6ZUG5 572 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 FAM177A1Q8N128 213 aaPredicted RBP22.02■■□□□ 1.12
UPK3B-203ENST00000394849 TCP11Q8WWU5 503 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 PRPF31Q8WWY3 499 aaKnown RBP22.02■■□□□ 1.12
UPK3B-203ENST00000394849 BRF1Q92994 677 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 GJA10Q969M2 543 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 ZNF707Q96C28 371 aaPredicted RBP22.02■■□□□ 1.12
UPK3B-203ENST00000394849 PRKD2Q9BZL6 878 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 CHST7Q9NS84 486 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 VPS54Q9P1Q0 977 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 FNIP2Q9P278 1114 aa22.02■■□□□ 1.12
UPK3B-203ENST00000394849 CACNA1IQ9P0X4 2223 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 ERLIN2O94905 339 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 DCNP07585 359 aaKnown RBP22.01■■□□□ 1.11
UPK3B-203ENST00000394849 SRGAP2CP0DJJ0 459 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 STARD6P59095 220 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 DSC1Q08554 894 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 HTR4Q13639 388 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 NTRK3Q16288 839 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 ZNF528Q3MIS6 628 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 HACE1Q8IYU2 909 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 GPR161Q8N6U8 529 aaKnown RBP22.01■■□□□ 1.11
UPK3B-203ENST00000394849 PJA1Q8NG27 643 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 ETNPPLQ8TBG4 499 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 MBOAT7Q96N66 472 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 SLC26A6Q9BXS9 759 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 DHX33Q9H6R0 707 aaKnown RBP22.01■■□□□ 1.11
UPK3B-203ENST00000394849 PCDHA4Q9UN74 947 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 DNAH14Q0VDD8 3507 aa22.01■■□□□ 1.11
UPK3B-203ENST00000394849 TDRD15B5MCY1 1934 aaKnown RBP22■■□□□ 1.11
UPK3B-203ENST00000394849 ARL5CA6NH57 179 aa22■■□□□ 1.11
UPK3B-203ENST00000394849 KINO60870 393 aaKnown RBP22■■□□□ 1.11
UPK3B-203ENST00000394849 LAMTOR4Q0VGL1 99 aa22■■□□□ 1.11
UPK3B-203ENST00000394849 USP41Q3LFD5 358 aa22■■□□□ 1.11
UPK3B-203ENST00000394849 GALNT17Q6IS24 598 aa22■■□□□ 1.11
UPK3B-203ENST00000394849 NOTUMQ6P988 496 aa22■■□□□ 1.11
UPK3B-203ENST00000394849 TAS1R1Q7RTX1 841 aa22■■□□□ 1.11
UPK3B-203ENST00000394849 CEP170P1Q96L14 293 aa22■■□□□ 1.11
UPK3B-203ENST00000394849 NCOR2Q9Y618 2525 aa22■■□□□ 1.11
UPK3B-203ENST00000394849 PPP2R5CQ13362 524 aa21.99■■□□□ 1.11
UPK3B-203ENST00000394849 PLA2G4FQ68DD2 849 aa21.99■■□□□ 1.11
UPK3B-203ENST00000394849 GET4Q7L5D6 327 aaPredicted RBP21.99■■□□□ 1.11
UPK3B-203ENST00000394849 TRIM22Q8IYM9 498 aa21.99■■□□□ 1.11
UPK3B-203ENST00000394849 SMG8Q8ND04 991 aaKnown RBP21.99■■□□□ 1.11
UPK3B-203ENST00000394849 MINDY3Q9H8M7 445 aa21.99■■□□□ 1.11
UPK3B-203ENST00000394849 GIT1Q9Y2X7 761 aa21.99■■□□□ 1.11
UPK3B-203ENST00000394849 IPPQ9Y573 584 aa21.99■■□□□ 1.11
UPK3B-203ENST00000394849 CACNA1BQ00975 2339 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 TGM5O43548 720 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 TDP2O95551 362 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 P4HBP07237 508 aaKnown RBP21.98■■□□□ 1.11
UPK3B-203ENST00000394849 NPEPPSP55786 919 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 LILRA6Q6PI73 481 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 BLOC1S2Q6QNY1 142 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 OTUD6AQ7L8S5 288 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 PALB2Q86YC2 1186 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 RNF149Q8NC42 400 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 FAM20AQ96MK3 541 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 GAD1Q99259 594 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 AGXT2Q9BYV1 514 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 OSBPL6Q9BZF3 934 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 DDX25Q9UHL0 483 aaKnown RBP21.98■■□□□ 1.11
UPK3B-203ENST00000394849 FBXO4Q9UKT5 387 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 NUMBLQ9Y6R0 609 aa21.98■■□□□ 1.11
UPK3B-203ENST00000394849 MIA3Q5JRA6 1907 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms