RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 BAG2O95816 211 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 DSG3P32926 999 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 STK4Q13043 487 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 GRB10Q13322 594 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 TTLL4Q14679 1199 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ANKRD40Q6AI12 368 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 BTNL9Q6UXG8 535 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 USP50Q70EL3 339 aaPredicted RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 CATSPER3Q86XQ3 398 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 MSL3Q8N5Y2 521 aaKnown RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 C7orf43Q8WVR3 580 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ECT2Q9H8V3 914 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 JPH1Q9HDC5 661 aaPredicted RBP6.1□□□□□ -1.43
RFFL-202ENST00000394597 GGT7Q9UJ14 662 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 NOD1Q9Y239 953 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 ATP8A1Q9Y2Q0 1164 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 PFASO15067 1338 aa6.1□□□□□ -1.43
RFFL-202ENST00000394597 FAM237AA0A1B0GTK4 181 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 ANO9A1A5B4 782 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 K7ERI5 159 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 DLATP10515 647 aaKnown RBP6.09□□□□□ -1.43
RFFL-202ENST00000394597 CETPP11597 493 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 PTPRAP18433 802 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 ROR2Q01974 943 aaKnown RBP6.09□□□□□ -1.43
RFFL-202ENST00000394597 CALCOCO2Q13137 446 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 ARHGAP24Q8N264 748 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 SPATA4Q8NEY3 305 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 CEP70Q8NHQ1 597 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 RANBP17Q9H2T7 1088 aaKnown RBP6.09□□□□□ -1.43
RFFL-202ENST00000394597 TYW1Q9NV66 732 aaKnown RBP6.09□□□□□ -1.43
RFFL-202ENST00000394597 KBTBD4Q9NVX7 518 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 MYH14Q7Z406 1995 aaKnown RBP6.09□□□□□ -1.43
RFFL-202ENST00000394597 IGKV6D-41A0A0C4DH26 115 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 NPHP3-ACAD11A0A0J9YXS1 232 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 CCT8L1PA6NM43 557 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 PPP1R3GB7ZBB8 358 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 CXCL11O14625 94 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 STAM2O75886 525 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 MOCS3O95396 460 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 NR3C1P04150 777 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 YWHABP31946 246 aaKnown RBP6.09□□□□□ -1.43
RFFL-202ENST00000394597 RFC1P35251 1148 aaPredicted RBP6.09□□□□□ -1.43
RFFL-202ENST00000394597 MSH2P43246 934 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 SERPINB4P48594 390 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 DHX9Q08211 1270 aaKnown RBP6.09□□□□□ -1.43
RFFL-202ENST00000394597 EHHADHQ08426 723 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 NUGGCQ68CJ6 796 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 KDM7AQ6ZMT4 941 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 ARHGAP18Q8N392 663 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 NLGN2Q8NFZ4 835 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 FAM81AQ8TBF8 368 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 EZH1Q92800 747 aaPredicted RBP6.09□□□□□ -1.43
RFFL-202ENST00000394597 TIPINQ9BVW5 301 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 ETNK1Q9HBU6 452 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 TXLNGQ9NUQ3 528 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 KCND2Q9NZV8 630 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 STOML1Q9UBI4 398 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 LIMA1Q9UHB6 759 aaKnown RBP6.09□□□□□ -1.43
RFFL-202ENST00000394597 BZW2Q9Y6E2 419 aaKnown RBP6.09□□□□□ -1.43
RFFL-202ENST00000394597 MYH3P11055 1940 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 CICQ96RK0 1608 aaPredicted RBP6.09□□□□□ -1.43
RFFL-202ENST00000394597 TJP1Q07157 1748 aa6.09□□□□□ -1.43
RFFL-202ENST00000394597 M0QZ92 97 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 KRIT1O00522 736 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 PDE6CP51160 858 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 ZBTB17Q13105 803 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 PTPROQ16827 1216 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 MAP7D3Q8IWC1 876 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 TRIM42Q8IWZ5 723 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 SYT2Q8N9I0 419 aaPredicted RBP6.09□□□□□ -1.44
RFFL-202ENST00000394597 SYTL5Q8TDW5 730 aaPredicted RBP6.09□□□□□ -1.44
RFFL-202ENST00000394597 MAIP1Q8WWC4 291 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 HPS3Q969F9 1004 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 GPRASP2Q96D09 838 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 NAF1Q96HR8 494 aaKnown RBP6.09□□□□□ -1.44
RFFL-202ENST00000394597 HIC2Q96JB3 615 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 ADPGKQ9BRR6 497 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 WDR18Q9BV38 432 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 PITPNM2Q9BZ72 1349 aa6.09□□□□□ -1.44
RFFL-202ENST00000394597 VWA5AO00534 786 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 NFIBO00712 420 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 MAP3K7O43318 606 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 ARP10275 920 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 ZNF280AP59817 542 aaPredicted RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 MYL7Q01449 175 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 RCN2Q14257 317 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 FYB2Q5VWT5 728 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 GRAMD4Q6IC98 578 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 CCDC62Q6P9F0 684 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 BZW1Q7L1Q6 419 aaKnown RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 YTHDF3Q7Z739 585 aaKnown RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 ARL10Q8N8L6 244 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 LRRC8CQ8TDW0 803 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 NUDCD1Q96RS6 583 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 TAF1DQ9H5J8 278 aaPredicted RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.08□□□□□ -1.44
RFFL-202ENST00000394597 TRIM10Q9UDY6 481 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 CCL15-CCL14A0A0B4J2E2 113 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 CCDC189A1A4V9 331 aa6.08□□□□□ -1.44
RFFL-202ENST00000394597 ADM5C9JUS6 153 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms